Evidence map›Paper›PMID 27524203›Full record

ArticleStructure (London, England : 1993)2016

Domain-Swapped Dimers of Intracellular Lipid-Binding Proteins: Evidence for Ordered Folding Intermediates.

Zahra Assar, Zahra Nossoni, Wenjing Wang, Elizabeth M Santos, Kevin Kramer, Colin McCornack, Chrysoula Vasileiou, Babak Borhan, James H Geiger

Open access · bronzeAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.3field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Photoisomerization detected in a fully wavelength-tunable rhodopsin mimic system.Acta crystallographica. Section D, Structural biology · 2026
    Article
  3. Molecular analysis of 3D domain swapping in the acylphosphatase from Escherichia coli.Acta crystallographica. Section D, Structural biology · 2026
    Article
  4. Understanding domain swapping in the c-Src SH3 domain through hinge-loop mutagenesis.Acta crystallographica. Section D, Structural biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Protein Assembly by Design.Chemical reviews · 2021
    Review
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Zahra AssarDepartment of Chemistry, Michigan State University, East Lansing, MI 48824, USA.
Zahra NossoniDepartment of Chemistry, Michigan State University, East Lansing, MI 48824, USA.
Wenjing WangDepartment of Chemistry, Michigan State University, East Lansing, MI 48824, USA.
Elizabeth M SantosDepartment of Chemistry, Michigan State University, East Lansing, MI 48824, USA.
Kevin KramerDepartment of Chemistry, Michigan State University, East Lansing, MI 48824, USA.
Colin McCornackDepartment of Chemistry, Michigan State University, East Lansing, MI 48824, USA.
Chrysoula VasileiouDepartment of Chemistry, Michigan State University, East Lansing, MI 48824, USA.
Babak BorhanDepartment of Chemistry, Michigan State University, East Lansing, MI 48824, USA. Electronic address: babak@chemistry.msu.edu.
James H GeigerDepartment of Chemistry, Michigan State University, East Lansing, MI 48824, USA. Electronic address: geiger@chemistry.msu.edu.
Michigan State University · US

Funding

Protein/Chromphore Interactions via Protein Design: Interrogation and ApplicationR01GM101353 · NIGMS · MICHIGAN STATE UNIVERSITY · PI BORHAN, BABAK, GEIGER, JAMES H · 2013 to 2022
$2.6M
NIGMS NIH HHS R01 GM101353
6 · The paper itself

Abstract

Human Cellular Retinol Binding Protein II (hCRBPII), a member of the intracellular lipid-binding protein family, is a monomeric protein responsible for the intracellular transport of retinol and retinal. Herein we report that hCRBPII forms an extensive domain-swapped dimer during bacterial expression. The domain-swapped region encompasses almost half of the protein. The dimer represents a novel structural architecture with the mouths of the two binding cavities facing each other, producing a new binding cavity that spans the length of the protein complex. Although wild-type hCRBPII forms the dimer, the propensity for dimerization can be substantially increased via mutation at Tyr60. The monomeric form of the wild-type protein represents the thermodynamically more stable species, making the domain-swapped dimer a kinetically trapped entity. Hypothetically, the wild-type protein has evolved to minimize dimerization of the folding intermediate through a critical hydrogen bond (Tyr60-Glu72) that disfavors the dimeric form.

Indexed as

Amino Acid SubstitutionAmino Acid MotifsBinding SitesCrystallography, X-RayGene ExpressionGlutamic AcidHumansHydrogen BondingKineticsModels, MolecularMutationProtein BindingProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandProtein DomainsProtein FoldingGlutamic AcidRBP2 protein, humanRecombinant ProteinsRetinol-Binding Proteins, CellularTyrosine

Identifiers

PMID27524203
PMCPMC5330279
OpenAlexW2515484156

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.