Evidence map›Paper›PMID 27522929›Full record

ArticleBrazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]

Use of homologous recombination in yeast to create chimeric bovine viral diarrhea virus cDNA clones.

Sandra Arenhart, José Valter Joaquim Silva, Eduardo Furtado Flores, Rudi Weiblen, Laura Helena Vega Gonzales Gil

Open access · hybridAbstract read
In one paragraph

Article in Brazilian journal of microbiology : [publication of the Brazilian Society for Microbiology]. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact, top 93% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sandra ArenhartFundação Oswaldo Cruz (Fiocruz), Centro de Pesquisas Aggeu Magalhães (CPqAM), Departamento de Virologia e Terapia Experimental, Recife, PE, Brazil; Universidade Federal de Santa Maria, Centro de Ciências Rurais (CCR), Departamento de Medicina Veterinária Preventiva (DMVP), Santa Maria, RS, Brazil.
José Valter Joaquim SilvaFundação Oswaldo Cruz (Fiocruz), Centro de Pesquisas Aggeu Magalhães (CPqAM), Departamento de Virologia e Terapia Experimental, Recife, PE, Brazil.
Eduardo Furtado FloresUniversidade Federal de Santa Maria, Centro de Ciências Rurais (CCR), Departamento de Medicina Veterinária Preventiva (DMVP), Santa Maria, RS, Brazil.
Rudi WeiblenUniversidade Federal de Santa Maria, Centro de Ciências Rurais (CCR), Departamento de Medicina Veterinária Preventiva (DMVP), Santa Maria, RS, Brazil.
Laura Helena Vega Gonzales GilFundação Oswaldo Cruz (Fiocruz), Centro de Pesquisas Aggeu Magalhães (CPqAM), Departamento de Virologia e Terapia Experimental, Recife, PE, Brazil. Electronic address: laura@cpqam.fiocruz.br.
Universidade Federal de Santa Maria · BRFundação Oswaldo Cruz · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The open reading frame of a Brazilian bovine viral diarrhea virus (BVDV) strain, IBSP4ncp, was recombined with the untranslated regions of the reference NADL strain by homologous recombination in Saccharomyces cerevisiae, resulting in chimeric full-length cDNA clones of BVDV (chi-NADL/IBSP4ncp#2 and chi-NADL/IBSP4ncp#3). The recombinant clones were successfully recovered, resulting in viable viruses, having the kinetics of replication, focus size, and morphology similar to those of the parental virus, IBSP4ncp. In addition, the chimeric viruses remained stable for at least 10 passages in cell culture, maintaining their replication efficiency unaltered. Nucleotide sequencing revealed a few point mutations; nevertheless, the phenotype of the rescued viruses was nearly identical to that of the parental virus in all experiments. Thus, genetic stability of the chimeric clones and their phenotypic similarity to the parental virus confirm the ability of the yeast-based homologous recombination to maintain characteristics of the parental virus from which the recombinant viruses were derived. The data also support possible use of the yeast system for the manipulation of the BVDV genome.

Indexed as

DNA, ComplementaryGenome, ViralHomologous RecombinationAnimalsCattleCell LineDiarrhea Viruses, Bovine ViralOpen Reading FramesSequence Analysis, DNAVirus ReplicationYeastsDNA, ComplementaryBVDVInfectious clonePestivirusReverse geneticsYeast homologous recombination

Identifiers

PMID27522929
PMCPMC5052387
OpenAlexW2501448498

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.