Evidence map›Paper›PMID 27520790›Full record

ArticleJournal of experimental botany2016

Silencing of the potato StNAC103 gene enhances the accumulation of suberin polyester and associated wax in tuber skin.

Roger Verdaguer, Marçal Soler, Olga Serra, Aïda Garrote, Sandra Fernández, Dolors Company-Arumí, Enriqueta Anticó, Marisa Molinas, Mercè Figueras

Open access · bronzeAbstract read
In one paragraph

Article in Journal of experimental botany, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
9.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 82 citations in OpenAlex.

  1. Article
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  6. Article
  7. Suberin Biosynthesis, Assembly, and Regulation.Plants (Basel, Switzerland) · 2022
    Review
  8. Review
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. The Cutinase Bdo_10846 Play an Important Role in the Virulence ofInternational journal of molecular sciences · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Overexpression of ANAC046 Promotes Suberin Biosynthesis in Roots ofInternational journal of molecular sciences · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Roger VerdaguerLaboratori del Suro, Biology Department, Campus Montilivi, E-17071 Girona, Catalonia, Spain.ORCID 0000-0003-4592-1906
Marçal SolerLaboratori del Suro, Biology Department, Campus Montilivi, E-17071 Girona, Catalonia, Spain Laboratoire de Recherche en Sciences Végétales, UMR5546, Université Toulouse III/CNRS, BP 42617, Auzeville, 31326 Castanet Tolosan, France.ORCID 0000-0002-9138-9394
Olga SerraLaboratori del Suro, Biology Department, Campus Montilivi, E-17071 Girona, Catalonia, Spain.ORCID 0000-0002-1678-0932
Aïda GarroteLaboratori del Suro, Biology Department, Campus Montilivi, E-17071 Girona, Catalonia, Spain.ORCID 0000-0003-2746-1520
Sandra FernándezLaboratori del Suro, Biology Department, Campus Montilivi, E-17071 Girona, Catalonia, Spain.ORCID 0000-0002-4300-0778
Dolors Company-ArumíLaboratori del Suro, Biology Department, Campus Montilivi, E-17071 Girona, Catalonia, Spain.ORCID 0000-0001-7739-3736
Enriqueta AnticóChemistry Department, Faculty of Sciences, University of Girona, Campus Montilivi, E-17071 Girona, Catalonia, Spain.ORCID 0000-0003-0053-0119
Marisa MolinasLaboratori del Suro, Biology Department, Campus Montilivi, E-17071 Girona, Catalonia, Spain.ORCID 0000-0002-5623-5066
Mercè FiguerasLaboratori del Suro, Biology Department, Campus Montilivi, E-17071 Girona, Catalonia, Spain merce.figueras@udg.edu.ORCID 0000-0002-6288-1830
Universitat de Girona · ESCentre National de la Recherche Scientifique · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Suberin and wax deposited in the cork (phellem) layer of the periderm form the lipophilic barrier that protects mature plant organs. Periderm lipids have been widely studied for their protective function with regards to dehydration and for how they respond to environmental stresses and wounding. However, despite advances in the biosynthetic pathways of suberin and associated wax, little is known about the regulation of their deposition. Here, we report on a potato NAC transcription factor gene, StNAC103, induced in the tuber phellem (skin). The StNAC103 promoter is active in cells undergoing suberization such as in the basal layer of the phellem, but also in the root apical meristem. Gene silencing in potato periderm correlates with an increase in the suberin and wax load, and specifically in alkanes, ω-hydroxyacids, diacids, ferulic acid, and primary alcohols. Concomitantly, silenced lines also showed up-regulation of key genes related to the biosynthesis and transport of suberin and wax in the tuber periderm. Taken together, our results suggest that StNAC103 has a role in the tight regulation of the formation of apoplastic barriers and is, to the best of our knowledge, the first candidate gene to be identified as being involved in the repression of suberin and wax deposition.

Indexed as

Gene Expression Regulation, PlantGene SilencingGenes, PlantLipidsPlant ProteinsPlant TubersSolanum tuberosumTranscription FactorsWaxesLipidsPlant ProteinssuberinTranscription FactorsWaxesApoplastic barriersNAC transcription factorperidermphellemregulationStNAC103suberinsuberin-associated waxtuber.

Identifiers

PMID27520790
PMCPMC5049391
OpenAlexW2509018268

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.