Evidence map›Paper›PMID 27519552›Full record

ArticleMetabolic engineering2016

Engineering a microbial platform for de novo biosynthesis of diverse methylxanthines.

Maureen McKeague, Yen-Hsiang Wang, Aaron Cravens, Maung Nyan Win, Christina D Smolke

Open access · greenAbstract read
In one paragraph

Article in Metabolic engineering, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 47 citations in OpenAlex.

  1. Review
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  4. Computational biology predicts metabolic engineering targets for increased production of 103 valuable chemicals in yeast.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  7. Metabolic modulation and multi-species interaction:Frontiers in cellular and infection microbiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Maureen McKeagueDepartment of Bioengineering, Stanford University, 443 Via Ortega, MC 4245, Stanford, CA 94305, United States.
Yen-Hsiang WangDepartment of Bioengineering, Stanford University, 443 Via Ortega, MC 4245, Stanford, CA 94305, United States.
Aaron CravensDepartment of Bioengineering, Stanford University, 443 Via Ortega, MC 4245, Stanford, CA 94305, United States.
Maung Nyan WinSynthetic Genomics, La Jolla, CA 92037, United States.
Christina D SmolkeDepartment of Bioengineering, Stanford University, 443 Via Ortega, MC 4245, Stanford, CA 94305, United States. Electronic address: csmolke@stanford.edu.
Stanford University · USSynthetic Genomics (United States) · US

Funding

Synthetic Biology Platforms for Natural Product Discovery and BiosynthesisDP1AT007886 · NCCIH · STANFORD UNIVERSITY · PI SMOLKE, CHRISTINA D · 2012 to 2016
$3.9M
NCCIH NIH HHS DP1 AT007886
6 · The paper itself

Abstract

Engineered microbial biosynthesis of plant natural products can support manufacturing of complex bioactive molecules and enable discovery of non-naturally occurring derivatives. Purine alkaloids, including caffeine (coffee), theophylline (antiasthma drug), theobromine (chocolate), and other methylxanthines, play a significant role in pharmacology and food chemistry. Here, we engineered the eukaryotic microbial host Saccharomyces cerevisiae for the de novo biosynthesis of methylxanthines. We constructed a xanthine-to-xanthosine conversion pathway in native yeast central metabolism to increase endogenous purine flux for the production of 7-methylxanthine, a key intermediate in caffeine biosynthesis. Yeast strains were further engineered to produce caffeine through expression of several enzymes from the coffee plant. By expressing combinations of different N-methyltransferases, we were able to demonstrate re-direction of flux to an alternate pathway and develop strains that support the production of diverse methylxanthines. We achieved production of 270μg/L, 61μg/L, and 3700μg/L of caffeine, theophylline, and 3-methylxanthine, respectively, in 0.3-L bench-scale batch fermentations. The constructed strains provide an early platform for de novo production of methylxanthines and with further development will advance the discovery and synthesis of xanthine derivatives.

Indexed as

Batch Cell Culture TechniquesBiosynthetic PathwaysCaffeineCoffeaMetabolic EngineeringMetabolic Networks and PathwaysPlant ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsXanthinesCaffeinemethylxanthinePlant ProteinsSaccharomyces cerevisiae ProteinsXanthinesMethylxanthinesPlant natural productsPurine alkaloidsSynthetic biologyYeast

Identifiers

PMID27519552
PMCPMC5107131
OpenAlexW2499340597

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.