Evidence map›Paper›PMID 27519413›Full record

ArticleThe Journal of biological chemistry2016

Escherichia coli RadD Protein Functionally Interacts with the Single-stranded DNA-binding Protein.

Stefanie H Chen, Rose T Byrne-Nash, Michael M Cox

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Generation and Repair of Postreplication Gaps in Escherichia coli.Microbiology and molecular biology reviews : MMBR · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Stefanie H ChenFrom the Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706 slchen3@wisc.edu.
Rose T Byrne-NashFrom the Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706.
Michael M CoxFrom the Department of Biochemistry, University of Wisconsin-Madison, Madison, Wisconsin 53706.
University of Wisconsin–Madison · US

Funding

THE BIOCHEMISTRY OF GENETIC RECOMBINATION/RECA PROTEINR01GM032335 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COX, MICHAEL M. · 1985 to 2014
$6.8M
Mechanisms and applications of recombinational DNA repairU01GM032335 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COX, MICHAEL M. · 2015 to 2018
$1.7M
NIGMS NIH HHS R01 GM032335NIGMS NIH HHS U01 GM032335
6 · The paper itself

Abstract

The bacterial single-stranded DNA binding protein (SSB) acts as an organizer of DNA repair complexes. The radD gene was recently identified as having an unspecified role in repair of radiation damage and, more specifically, DNA double-strand breaks. Purified RadD protein displays a DNA-independent ATPase activity. However, ATP hydrolytic rates are stimulated by SSB through its C terminus. The RadD and SSB proteins also directly interact in vivo in a yeast two-hybrid assay and in vitro through ammonium sulfate co-precipitation. Therefore, it is likely that the repair function of RadD is mediated through interaction with SSB at the site of damage.

Indexed as

DNA DamageAdenosine TriphosphatasesDNA, BacterialDNA-Binding ProteinsEscherichia coliEscherichia coli ProteinsProtein BindingAdenosine TriphosphatasesDNA, BacterialDNA-Binding ProteinsEscherichia coli ProteinsSSB protein, E coliYejH protein, E coliATPaseDNA repairhelicaseprotein-DNA interactionprotein-protein interactionradiation biologySSB

Identifiers

PMID27519413
PMCPMC5034066
OpenAlexW2515298977

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.