Evidence map›Paper›PMID 27517885›Full record

ArticleMolecules (Basel, Switzerland)2016

The Complete Chloroplast Genome Sequence of the Medicinal Plant Swertia mussotii Using the PacBio RS II Platform.

Beibei Xiang, Xiaoxue Li, Jun Qian, Lizhi Wang, Lin Ma, Xiaoxuan Tian, Yong Wang

Abstract read
In one paragraph

Article in Molecules (Basel, Switzerland), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. The complete chloroplast genome sequence ofMitochondrial DNA. Part B, Resources · 2023
    Article
  6. Characteristics of the complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2023
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Chloroplast Genomes of Two Species ofFrontiers in plant science · 2021
    Article
  12. Complete chloroplast genome sequence ofChinese herbal medicines · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Complete chloroplast genome sequence ofMitochondrial DNA. Part B, Resources · 2019
    Article
  18. Article
  19. Comparative and Phylogenetic Analyses of Ginger (Plants (Basel, Switzerland) · 2019
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Beibei XiangSchool of Chinese Materia Medica, Tianjin University of Traditional Chinese Medicine, Anshan Road 312, Tianjin 300193, China. xiangbeibei03230@163.com.
Xiaoxue LiCollege of Life Science, Nankai University, Weijin Road 94, Tianjin 300071, China. m15822139395@163.com.
Jun QianInstitute of Medicinal Plant Development, Chinese Academy of Medical Sciences and Peking Union Medical College, Malianwa North Road 151, Beijing 100193, China. qianjun@ymail.com.
Lizhi WangSchool of Chinese Materia Medica, Tianjin University of Traditional Chinese Medicine, Anshan Road 312, Tianjin 300193, China. lzhwang_2009@163.com.
Lin MaSchool of Chinese Materia Medica, Tianjin University of Traditional Chinese Medicine, Anshan Road 312, Tianjin 300193, China. malin7983@163.com.
Xiaoxuan TianTianjin State Key Laboratory of Modern Chinese Medicine, Tianjin University of Traditional Chinese Medicine, Anshan Road 312, Tianjin 300193, China. tian_xiaoxuan@tjutcm.edu.cn.
Yong WangCollege of Life Science, Nankai University, Weijin Road 94, Tianjin 300071, China. wangyong@nankai.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Swertia mussotii is an important medicinal plant that has great economic and medicinal value and is found on the Qinghai Tibetan Plateau. The complete chloroplast (cp) genome of S. mussotii is 153,431 bp in size, with a pair of inverted repeat (IR) regions of 25,761 bp each that separate an large single-copy (LSC) region of 83,567 bp and an a small single-copy (SSC) region of 18,342 bp. The S. mussotii cp genome encodes 84 protein-coding genes, 37 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The identity, number, and GC content of S. mussotii cp genes were similar to those in the genomes of other Gentianales species. Via analysis of the repeat structure, 11 forward repeats, eight palindromic repeats, and one reverse repeat were detected in the S. mussotii cp genome. There are 45 SSRs in the S. mussotii cp genome, the majority of which are mononucleotides found in all other Gentianales species. An entire cp genome comparison study of S. mussotii and two other species in Gentianaceae was conducted. The complete cp genome sequence provides intragenic information for the cp genetic engineering of this medicinal plant.

Indexed as

Genome, ChloroplastChloroplast ProteinsPlants, MedicinalRNA, PlantSwertiaChloroplast ProteinsRNA, Plantchloroplast genomeGentianaceaemedicinal plantPacBio RSSwertia mussotii

Identifiers

PMID27517885
PMCPMC6274542

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.