Evidence map›Paper›PMID 27516416›Full record

ArticlePlant & cell physiology2016

The Blue Light-Dependent Polyubiquitination and Degradation of Arabidopsis Cryptochrome2 Requires Multiple E3 Ubiquitin Ligases.

Qing Liu, Qin Wang, Bin Liu, Wei Wang, Xu Wang, Joon Park, Zhenming Yang, Xinglin Du, Mingdi Bian, Chentao Lin

Open access · bronzeAbstract read
In one paragraph

Article in Plant & cell physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.1field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Qing LiuLaboratory of Soil and Plant Molecular Genetics, College of Plant Science, Jilin University, Changchun 130062, China.
Qin WangBasic Forestry and Proteomics Research Center, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Bin LiuInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Beijing 100081, China.
Wei WangBasic Forestry and Proteomics Research Center, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Xu WangBasic Forestry and Proteomics Research Center, Haixia Institute of Science and Technology, Fujian Agriculture and Forestry University, Fuzhou 350002, China.
Joon ParkDepartment of Molecular, Cell & Developmental Biology, University of California, Los Angeles, CA 90095, USA.
Zhenming YangLaboratory of Soil and Plant Molecular Genetics, College of Plant Science, Jilin University, Changchun 130062, China.
Xinglin DuLaboratory of Soil and Plant Molecular Genetics, College of Plant Science, Jilin University, Changchun 130062, China bianmingdiucla@163.com xldu@jlu.edu.cn.
Mingdi BianLaboratory of Soil and Plant Molecular Genetics, College of Plant Science, Jilin University, Changchun 130062, China bianmingdiucla@163.com xldu@jlu.edu.cn.
Chentao LinLaboratory of Soil and Plant Molecular Genetics, College of Plant Science, Jilin University, Changchun 130062, China.
Jilin University · CNUniversity of California, Los Angeles · USFujian Agriculture and Forestry University · CNChinese Academy of Agricultural Sciences · CN

Funding

The signaling mechanisms of Arabidopsis CRY2R01GM056265 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI LIN, CHENTAO · 2001 to 2021
$9.5M
NIGMS NIH HHS R01 GM056265
6 · The paper itself

Abstract

Cryptochromes are blue light receptors regulated by light-dependent ubiquitination and degradation in both plant and animal lineages. The Arabidopsis genome encodes two cryptochromes, CRY1 and CRY2, of which CRY2 undergoes blue light-dependent ubiquitination and 26S proteasome-dependent degradation. The molecular mechanism regulating blue light-dependent proteolysis of CRY2 is still not fully understood. We found that the F-box proteins ZEITLUPE (ZTL) and Lov Kelch Protein2 (LKP2), which mediate blue light suppression of degradation of the CRY2 signaling partner CIB1, are not required for the blue light-dependent CRY2 degradation. We further showed that the previously reported function of the COP1-SPA1 protein complex in blue light-dependent CRY2 degradation is more likely to be attributable to its cullin 4 (CUL4)-based E3 ubiquitin ligase activity than its activity as the cryptochrome signaling partner. However, the blue light-dependent CRY2 degradation is only partially impaired in the cul4 mutant, the cop1-5 null mutant and the spa1234 quadruple mutant, suggesting a possible involvement of additional E3 ubiquitin ligases in the regulation of CRY2. Consistent with this hypothesis, we demonstrated that the blue light-dependent CRY2 degradation is significantly impaired in the temperature-sensitive cul1 mutant allele (axr6-3), especially under the non-permissive temperature. Based on these and other results presented, we propose that photoexcited CRY2 undergoes Lys48-linked polyubiquitination catalyzed by the CUL4- and CUL1-based E3 ubiquitin ligases.

Indexed as

LightArabidopsisArabidopsis ProteinsCryptochromesLysineMutationPolyubiquitinProtein DomainsProteolysisUbiquitinationUbiquitin-Protein LigasesArabidopsis ProteinsCRY2 protein, ArabidopsisCryptochromesLysinePolyubiquitinUbiquitin-Protein LigasesArabidopsis thalianaCRY2DegradationUbiquitin E3 ligase

Identifiers

PMID27516416
PMCPMC6083963
OpenAlexW2508663058

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.