Evidence map›Paper›PMID 27515763›Full record

ArticleVirology journal2016

HPV genotype distribution in Brazilian women with and without cervical lesions: correlation to cytological data.

Toni Ricardo Martins, Cristina Mendes de Oliveira, Luciana Reis Rosa, Cristiane de Campos Centrone, Célia Luiza Regina Rodrigues, Luisa Lina Villa, José Eduardo Levi

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 41 citations in OpenAlex.

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  20. PCR-RFLP assay as an option for primary HPV test.Brazilian journal of medical and biological research = Revista brasileira de pesquisas medicas e biologica · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Toni Ricardo MartinsInstitute of Tropical Medicine, Universidade de São Paulo, Virology Laboratory / LIM 52, Dr. Enéas Carvalho de Aguiar, 470, CEP: 05403-000, São Paulo, SP, Brazil. trmartins@usp.br.
Cristina Mendes de OliveiraInstitute of Tropical Medicine, Universidade de São Paulo, Virology Laboratory / LIM 52, Dr. Enéas Carvalho de Aguiar, 470, CEP: 05403-000, São Paulo, SP, Brazil.
Luciana Reis RosaInstitute of Tropical Medicine, Universidade de São Paulo, Virology Laboratory / LIM 52, Dr. Enéas Carvalho de Aguiar, 470, CEP: 05403-000, São Paulo, SP, Brazil.
Cristiane de Campos CentroneInstitute of Tropical Medicine, Universidade de São Paulo, Virology Laboratory / LIM 52, Dr. Enéas Carvalho de Aguiar, 470, CEP: 05403-000, São Paulo, SP, Brazil.
Célia Luiza Regina RodriguesInstitute of Tropical Medicine, Universidade de São Paulo, Virology Laboratory / LIM 52, Dr. Enéas Carvalho de Aguiar, 470, CEP: 05403-000, São Paulo, SP, Brazil.
Luisa Lina VillaDepartment of Oncology and Radiology, Universidade de São Paulo, School of Medicine, São Paulo, Brazil.
José Eduardo LeviInstitute of Tropical Medicine, Universidade de São Paulo, Virology Laboratory / LIM 52, Dr. Enéas Carvalho de Aguiar, 470, CEP: 05403-000, São Paulo, SP, Brazil.
Universidade de São Paulo · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHuman Papillomavirus (HPV) genotype distribution varies according to the method of assessment and population groups. This study analyzed type-specific HPV infections among women ranging from 14-95 years old, displaying normal and abnormal cytology, from São Paulo and Barretos cities, Brazil.

methodsWomen found positive for High Risk-HPVs DNA by either the Hybrid Capture 2 (HC2) or Cobas HPV Test (n = 431) plus a random sample of 223 negative by both assays and 11 samples with indeterminate results, totalizing 665 samples, were submitted to HPV detection by the PapilloCheck test. Cytological distribution included 499 women with a cytological result of Negative for Intraepithelial Lesion or Malignancy and 166 with some abnormality as follows: 54 Atypical Squamous Cells of Undetermined Significance; 66 Low-Grade Squamous Intraepithelial Lesion; 43 High-Grade Squamous Intraepithelial Lesion and 3 (0.5 %) Invasive Cervical Cancer.

resultsFrom the 323 samples (48.6 %) that had detectable HPV-DNA by the PapilloCheck assay, 31 were HPV negative by the cobas HPV and HC2 assays. Out of these 31 samples, 14 were associated with HR-HPVs types while the remaining 17 harbored exclusively low-risk HPVs. In contrast, 49 samples positive by cobas HPV and HC 2 methods tested negative by the PapilloCheck assay (19.8 %). Overall, the most frequent HR-HPV type was HPV 16 (23.2 %), followed by 56 (21.0 %), 52 (8.7 %) and 31 (7.7 %) and the most frequent LR-HPV type was HPV 42 (12.1 %) followed by 6 (6.2 %). Among the HR-HPV types, HPV 56 and 16 were the most frequent types in NILM, found in 19.1 and 17.7 % of the patients respectively while in HSIL and ICC cases, HPV 16 was the predominant type, detected in 37.2 and 66.7 % of these samples.

conclusionsIn the population studied, HPV 16 and 56 were the most frequently detected HR-HPV types. HPV 56 was found mainly in LSIL and NILM suggesting a low oncogenic potential. HPV 16 continues to be the most prevalent type in high-grade lesions whereas HPV 18 was found in a low frequency both in NILM and abnormal smears. Surveillance of HPV infections by molecular methods is an important tool for the development and improvement of prevention strategies.

Indexed as

AdolescentAdultAgedAged, 80 and overBrazilFemaleGenotypeHumansMiddle AgedPapillomaviridaePapillomavirus InfectionsUterine Cervical NeoplasmsVaginal SmearsYoung AdultCervical CancerCytologyHPVHPV typesPapilloCheck

Identifiers

PMID27515763
PMCPMC4982268
OpenAlexW2518081258

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.