Evidence map›Paper›PMID 27515670›Full record

ArticleJournal of biomolecular NMR2016

Analytical optimization of active bandwidth and quality factor for TOCSY experiments in NMR spectroscopy.

Paul Coote, Wolfgang Bermel, Gerhard Wagner, Haribabu Arthanari

Abstract read
In one paragraph

Article in Journal of biomolecular NMR, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

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5 · Who and what money

Authors and funding

4 authors.

Paul CooteHarvard Medical School, Boston, MA, USA.
Wolfgang BermelBruker BioSpin GmbH, Silberstrifen 4, 76287, Rheinstetten, Germany.
Gerhard WagnerHarvard Medical School, Boston, MA, USA.
Haribabu ArthanariHarvard Medical School, Boston, MA, USA. hari@hms.harvard.edu.

Funding

T CELL SPECIFIC TRANSCRIPTION COMPLEXESP01GM047467 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAGNER, GERHARD · 1992 to 2017
$28.6M
OverallP41EB002026 · NIBIB · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI GRIFFIN, ROBERT GUY · 2003 to 2018
$17.9M
Structure and interactions of the Voltage-Dependent Anion Channel(VDAC)R01GM075879 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WAGNER, GERHARD · 2005 to 2013
$2.3M
NIBIB NIH HHS P41 EB002026NIGMS NIH HHS P01 GM047467NIGMS NIH HHS R01 GM075879
6 · The paper itself

Abstract

Active bandwidth and global quality factor are the two main metrics used to quantitatively compare the performance of TOCSY mixing sequences. Active bandwidth refers to the spectral region over which at least 50 % of the magnetization is transferred via a coupling. Global quality factor scores mixing sequences according to the worst-case transfer over a range of possible mixing times and chemical shifts. Both metrics reward high transfer efficiency away from the main diagonal of a two-dimensional spectrum. They can therefore be used to design mixing sequences that will function favorably in experiments. Here, we develop optimization methods tailored to these two metrics, including precise control of off-diagonal cross peak buildup rates. These methods produce square shaped transfer efficiency profiles, directly matching the desirable properties that the metrics are intended to measure. The optimization methods are analytical, rather than numerical. The two resultant shaped pulses have significantly higher active bandwidth and quality factor, respectively, than all other known sequences. They are therefore highly suitable for use in NMR spectroscopy. We include experimental verification of these improved waveforms on small molecule and protein samples.

Indexed as

Models, TheoreticalAlgorithmsMagnetic Resonance SpectroscopyActive bandwidthNMR spectroscopyOptimizationPulse designQuality factorSpin dynamicsTOCSY

Identifiers

PMID27515670
PMCPMC5175489

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.