Evidence map›Paper›PMID 27513459›Full record

ArticlePloS one2016

Geography of Genetic Structure in Barley Wild Relative Hordeum vulgare subsp. spontaneum in Jordan.

Imke Thormann, Patrick Reeves, Ann Reilley, Johannes M M Engels, Ulrike Lohwasser, Andreas Börner, Klaus Pillen, Christopher M Richards

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Imke ThormannBioversity International, Rome, Italy.ORCID http://orcid.org/0000-0003-2703-9805
Patrick ReevesNational Center for Genetic Resources Preservation, United States Department of Agriculture-Agricultural Research Service, Fort Collins, Colorado, United States of America.
Ann ReilleyNational Center for Genetic Resources Preservation, United States Department of Agriculture-Agricultural Research Service, Fort Collins, Colorado, United States of America.
Johannes M M EngelsBioversity International, Rome, Italy.
Ulrike LohwasserGenebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.
Andreas BörnerGenebank Department, Leibniz Institute of Plant Genetics and Crop Plant Research, Gatersleben, Germany.
Klaus PillenPlant Breeding, Institute for Agricultural and Nutritional Science, Martin-Luther-University Halle-Wittenberg, Halle, Germany.
Christopher M RichardsNational Center for Genetic Resources Preservation, United States Department of Agriculture-Agricultural Research Service, Fort Collins, Colorado, United States of America.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Informed collecting, conservation, monitoring and utilization of genetic diversity requires knowledge of the distribution and structure of the variation occurring in a species. Hordeum vulgare subsp. spontaneum (K. Koch) Thell., a primary wild relative of barley, is an important source of genetic diversity for barley improvement and co-occurs with the domesticate within the center of origin. We studied the current distribution of genetic diversity and population structure in H. vulgare subsp. spontaneum in Jordan and investigated whether it is correlated with either spatial or climatic variation inferred from publically available climate layers commonly used in conservation and ecogeographical studies. The genetic structure of 32 populations collected in 2012 was analyzed with 37 SSRs. Three distinct genetic clusters were identified. Populations were characterized by admixture and high allelic richness, and genetic diversity was concentrated in the northern part of the study area. Genetic structure, spatial location and climate were not correlated. This may point out a limitation in using large scale climatic data layers to predict genetic diversity, especially as it is applied to regional genetic resources collections in H. vulgare subsp. spontaneum.

Indexed as

Genetic VariationDNA, PlantGenes, PlantGenetic MarkersGenotypeGeographyHordeumJordanMicrosatellite RepeatsMultigene FamilyDNA, PlantGenetic Markers

Identifiers

PMID27513459
PMCPMC4981475

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.