Evidence map›Paper›PMID 27513449›Full record

ArticlePloS one2016

The RNA-Binding Protein, Polypyrimidine Tract-Binding Protein 1 (PTBP1) Is a Key Regulator of CD4 T Cell Activation.

James La Porta, Rodrigo Matus-Nicodemos, Aníbal Valentín-Acevedo, Lori R Covey

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
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  5. Raver1 linksProceedings of the National Academy of Sciences of the United States of America · 2025
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  7. Review
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  10. RNA Metabolism in T Lymphocytes.Immune network · 2022
    Review
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

James La PortaDepartment of Cell Biology and Neuroscience, Rutgers University, New Brunswick, New Jersey, United States of America.
Rodrigo Matus-NicodemosDepartment of Cell Biology and Neuroscience, Rutgers University, New Brunswick, New Jersey, United States of America.
Aníbal Valentín-AcevedoDepartment of Cell Biology and Neuroscience, Rutgers University, New Brunswick, New Jersey, United States of America.
Lori R CoveyDepartment of Cell Biology and Neuroscience, Rutgers University, New Brunswick, New Jersey, United States of America.ORCID http://orcid.org/0000-0002-5425-9427
Rutgers, The State University of New Jersey · US

Funding

Translational Regulation by the TNF Alpha AU-rich ElementP01AI057596 · NIAID · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI PESTKA, SIDNEY · 2004 to 2009
$8.8M
Generation and characterization of CD40L-modified MiceR03AI107811 · NIAID · RUTGERS, THE STATE UNIV OF N.J. · PI COVEY, LORI RUTH · 2013 to 2014
$149k
NIAID NIH HHS P01 AI057596NIAID NIH HHS R03 AI107811
6 · The paper itself

Abstract

We have previously shown that the RNA binding protein, polypyrimidine tract-binding protein (PTBP1) plays a critical role in regulating the expression of CD40L in activated CD4 T cells. This is achieved mechanistically through message stabilization at late times of activation as well as by altered distribution of CD40L mRNA within distinct cellular compartments. PTBP1 has been implicated in many different processes, however whether PTBP1 plays a broader role in CD4 T cell activation is not known. To examine this question, experiments were designed to introduce shRNA into primary human CD4 T cells to achieve decreased, but not complete ablation of PTBP1 expression. Analyses of shPTB-expressing CD4 T cells revealed multiple processes including cell proliferation, activation-induced cell death and expression of activation markers and cytokines that were regulated in part by PTBP1 expression. Although there was an overall decrease in the steady-state level of several activation genes, only IL-2 and CD40L appeared to be regulated by PTBP1 at the level of RNA decay suggesting that PTBP1 is critical at different regulatory steps of expression that is gene-specific. Importantly, even though the IL-2 protein levels were reduced in cells with lowered PTBP1, the steady-state level of IL-2 mRNA was significantly higher in these cells suggesting a block at the translational level. Evaluation of T cell activation in shPTB-expressing T cells revealed that PTBP1 was linked primarily to the activation of the PLCγ1/ERK1/2 and the NF-κB pathways. Overall, our results reveal the importance of this critical RNA binding protein in multiple steps of T cell activation.

Indexed as

Cell ProliferationAlternative SplicingCD4-Positive T-LymphocytesCells, CulturedHeterogeneous-Nuclear RibonucleoproteinsHumansInterleukin-2Lymphocyte ActivationNF-kappa BPolypyrimidine Tract-Binding ProteinRNA, MessengerRNA StabilityHeterogeneous-Nuclear RibonucleoproteinsInterleukin-2NF-kappa BPolypyrimidine Tract-Binding ProteinPTBP1 protein, humanRNA, Messenger

Identifiers

PMID27513449
PMCPMC4981342
OpenAlexW2518440581

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.