Evidence map›Paper›PMID 27512044›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Ultrapotent vinblastines in which added molecular complexity further disrupts the target tubulin dimer-dimer interface.

Daniel W Carney, John C Lukesh, Daniel M Brody, Manuela M Brütsch, Dale L Boger

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Review
  2. PIFA-Mediated Coupling of Vindoline with β-Ketoesters and Related Model Velbanamine Precursors.Synlett : accounts and rapid communications in synthetic organic chemistry · 2026
    Article
  3. TargetingPharmaceuticals (Basel, Switzerland) · 2026
    Article
  4. Supernatural Products.The Chemist · 2025
    Article
  5. Article
  6. Article
  7. Bisindole Alkaloids from theMolecules (Basel, Switzerland) · 2021
    Review
  8. Article
  9. Review
  10. Review
  11. Review
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Daniel W CarneyDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037; The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037.
John C LukeshDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037; The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037.
Daniel M BrodyDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037; The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037.
Manuela M BrütschDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037; The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037.
Dale L BogerDepartment of Chemistry, The Scripps Research Institute, La Jolla, CA 92037; The Skaggs Institute for Chemical Biology, The Scripps Research Institute, La Jolla, CA 92037 Boger@scripps.edu.

Funding

ANTITUMORE ANTIBIOTICS: STREPTONIGRIN AND LAVENDAMYCINR01CA042056 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI BOGER, DALE L · 1985 to 2024
$10.6M
Vindoline and VinblastineR01CA115526 · NCI · SCRIPPS RESEARCH INSTITUTE, THE · PI BOGER, DALE L · 2006 to 2015
$3.2M
NCI NIH HHS R01 CA042056NCI NIH HHS R01 CA115526
6 · The paper itself

Abstract

Approaches to improving the biological properties of natural products typically strive to modify their structures to identify the essential pharmacophore, or make functional group changes to improve biological target affinity or functional activity, change physical properties, enhance stability, or introduce conformational constraints. Aside from accessible semisynthetic modifications of existing functional groups, rarely does one consider using chemical synthesis to add molecular complexity to the natural product. In part, this may be attributed to the added challenge intrinsic in the synthesis of an even more complex compound. Herein, we report synthetically derived, structurally more complex vinblastines inaccessible from the natural product itself that are a stunning 100-fold more active (IC50 values, 50-75 pM vs. 7 nM; HCT116), and that are now accessible because of advances in the total synthesis of the natural product. The newly discovered ultrapotent vinblastines, which may look highly unusual upon first inspection, bind tubulin with much higher affinity and likely further disrupt the tubulin head-to-tail α/β dimer-dimer interaction by virtue of the strategic placement of an added conformationally well-defined, rigid, and extended C20' urea along the adjacent continuing protein-protein interface. In this case, the added molecular complexity was used to markedly enhance target binding and functional biological activity (100-fold), and likely represents a general approach to improving the properties of other natural products targeting a protein-protein interaction.

Indexed as

Chemistry Techniques, SyntheticAntineoplastic Agents, PhytogenicBinding SitesBiological ProductsCell Line, TumorDrug DesignHCT116 CellsHumansInhibitory Concentration 50Protein BindingProtein Interaction Domains and MotifsProtein MultimerizationProtein Structure, SecondaryStructure-Activity RelationshipTubulinTubulin ModulatorsAntineoplastic Agents, PhytogenicBiological ProductscatharanthineTubulinTubulin ModulatorsUreaVinblastineVinca Alkaloidsvindolinechemical synthesisdrug designprotein–protein interactiontubulinvinblastine

Identifiers

PMID27512044
PMCPMC5024590

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.