Evidence map›Paper›PMID 27508095›Full record

ArticleAmerican journal of cancer research2016

MicroRNAs-208b-3p, 204-5p, 129-2-3p and 3065-5p as predictive markers of oral leukoplakia that progress to cancer.

Elizabeth Philipone, Angela J Yoon, Shuang Wang, Jing Shen, Yen Chen Kevin Ko, Jill M Sink, Andrew Rockafellow, Nathanel A Shammay, Regina M Santella

Open access · greenAbstract read
In one paragraph

Article in American journal of cancer research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 30 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Elizabeth PhiliponeDivision of Oral and Maxillofacial Pathology, Columbia University College of Dental MedicineNew York, NY, USA; Departments of Pathology and Cell Biology, Columbia University College of Physicians and SurgeonsNew York, NY, USA.
Angela J YoonDivision of Oral and Maxillofacial Pathology, Columbia University College of Dental MedicineNew York, NY, USA; Departments of Pathology and Cell Biology, Columbia University College of Physicians and SurgeonsNew York, NY, USA.
Shuang WangDepartment of Biostatistics, Columbia University Mailman School of Public Health New York, NY, USA.
Jing ShenDepartment of Environmental Health Sciences, Columbia University Mailman School of Public Health New York, NY, USA.
Yen Chen Kevin KoDivision of Oral and Maxillofacial Pathology, Columbia University College of Dental Medicine New York, NY, USA.
Jill M SinkDivision of Oral and Maxillofacial Pathology, Columbia University College of Dental Medicine New York, NY, USA.
Andrew RockafellowColumbia University College of Dental Medicine New York, NY, USA.
Nathanel A ShammayColumbia University College of Dental Medicine New York, NY, USA.
Regina M SantellaDepartment of Environmental Health Sciences, Columbia University Mailman School of Public Health New York, NY, USA.
Columbia University · USNew York University · US

Funding

True Metal fac coreP30ES009089 · NIEHS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MATTHEW S PERZANOWSKI · 1998 to 2026
$44.7M
Predictive Value of MicroRNAs in the Progression of Oral LeukoplakiasR03DE023820 · NIDCR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI PHILIPONE, ELIZABETH · 2014 to 2015
$240k
NIDCR NIH HHS R03 DE023820NIEHS NIH HHS P30 ES009089
6 · The paper itself

Abstract

Leukoplakia is the most common precursor lesion of oral squamous cell carcinoma (OSCC). Currently, the risk of progression to OSCC is assessed based on histopathologic examination alone. However, this method fails to identify the subset of microscopically innocuous leukoplakia that ultimately transforms to OSCC. The aim of this study was to determine if microRNAs (miRNAs) can be utilized to identify non- and low-grade dysplastic oral lesions at risk for cancer progression. A retrospective study of genome-wide miRNA expression level analyses was performed in the training cohort (n=20) using deep sequencing formalin-fixed paraffin embedded incisional biopsy tissues from patients with oral leukoplakic lesions diagnosed with non- or low-grade dysplasia and known clinical outcome. The promising miRNA candidates were then evaluated in the validation cohort (n=80) using quantitative real-time PCR (qRT-PCR). Four promising miRNAs-208b-3p, 204-5p, 129-2-3p and 3065-5p were identified. Combining these four miRNAs as a panel with age and histologic diagnosis (p<0.004), our final model had a predictive value for the area under the receiver operating characteristic (ROC) curve (AUC) of 0.792, sensitivity of 76.9% and specificity of 73.7% to accurately identify non- and low-grade dysplastic lesions at risk of cancer progression, which is a significant improvement over histopathologic examination alone (AUC of 0.645). While further investigation is needed, discovery of predictive markers that can accurately identify histologically innocuous oral lesions at high risk for progression to OSSC will significantly improve clinical outcome by means of early intervention.

Indexed as

deep sequencingmicroRNAoral epithelial dysplasiaoral leukoplakiaoral squamous cell carcinomapredictive markersqRT-PCR

Identifiers

PMID27508095
PMCPMC4969402
OpenAlexW2520430845

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.