Evidence map›Paper›PMID 27508083›Full record

ArticleHuman genome variation2016

A spectrum of CYP1B1 mutations associated with primary congenital glaucoma in families of Pakistani descent.

Bushra Rauf, Bushra Irum, Firoz Kabir, Sabika Firasat, Muhammad Asif Naeem, Shaheen N Khan, Tayyab Husnain, Sheikh Riazuddin, Javed Akram, S Amer Riazuddin

Open access · goldAbstract read
In one paragraph

Article in Human genome variation, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed, 2 pooled it
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 2 syntheses or guidelines pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Article
  4. Article
  5. Insights intoLife (Basel, Switzerland) · 2025
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  6. Challenges and Opportunities in P450 Research on the Eye.Drug metabolism and disposition: the biological fate of chemicals · 2023
    Review
  7. Review
  8. Article
  9. Article
  10. Novel mutations inMolecular vision · 2020
    Article
  11. Review
  12. Article
  13. Two novel variants inInternational journal of ophthalmology · 2019
    Article
  14. Compound heterozygous mutations inInternational journal of ophthalmology · 2019
    Article
  15. Article
  16. Primary congenital and developmental glaucomas.Human molecular genetics · 2017
    Review
  17. Article
  18. Investigation ofMiddle East African journal of ophthalmology
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Bushra RaufThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD, USA; National Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Bushra IrumThe Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, MD, USA; National Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan.
Firoz KabirThe Wilmer Eye Institute, Johns Hopkins University School of Medicine , Baltimore, MD, USA.
Sabika FirasatNational Centre of Excellence in Molecular Biology, University of the Punjab , Lahore, Pakistan.
Muhammad Asif NaeemNational Centre of Excellence in Molecular Biology, University of the Punjab , Lahore, Pakistan.
Shaheen N KhanNational Centre of Excellence in Molecular Biology, University of the Punjab , Lahore, Pakistan.
Tayyab HusnainNational Centre of Excellence in Molecular Biology, University of the Punjab , Lahore, Pakistan.
Sheikh RiazuddinNational Centre of Excellence in Molecular Biology, University of the Punjab, Lahore, Pakistan; Allama Iqbal Medical College, University of Health Sciences, Lahore, Pakistan; National Centre for Genetic Diseases, Shaheed Zulfiqar Ali Bhutto Medical University, Islamabad, Pakistan.
Javed AkramAllama Iqbal Medical College, University of Health Sciences, Lahore, Pakistan; National Centre for Genetic Diseases, Shaheed Zulfiqar Ali Bhutto Medical University, Islamabad, Pakistan.
S Amer RiazuddinThe Wilmer Eye Institute, Johns Hopkins University School of Medicine , Baltimore, MD, USA.
Johns Hopkins Medicine · USUniversity of the Punjab · PKCentre of Excellence in Molecular Biology · PKUniversity of Health Sciences Lahore · PK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glaucoma is the second leading cause of blindness, affecting ~65 million people worldwide. We identified and ascertained a large cohort of inbred families with multiple individuals manifesting cardinal symptoms of primary congenital glaucoma (PCG) to investigate the etiology of the disease at a molecular level. Ophthalmic examinations, including slit-lamp microscopy and applanation tonometry, were performed to characterize the causal phenotype and confirm that affected individuals fulfilled the diagnostic criteria for PCG. Subsequently, exclusion analysis was completed with fluorescently labeled short tandem repeat markers, followed by Sanger sequencing to identify pathogenic variants. Exclusion analysis suggested linkage to the CYP1B1 locus, with positive two-point logarithm of odds scores in 23 families, while Sanger sequencing identified a total of 11 variants, including two novel mutations, in 23 families. All mutations segregated with the disease phenotype in their respective families. These included the following seven missense mutations: p.Y81N, p.E229K, p.R368H, p.R390H, p.W434R, p.R444Q and p.R469W, as well as one nonsense mutation, p.Q37*, and three frameshift mutations, p.W246Lfs81*, p.T404Sfs30* and p.P442Qfs15*. In conclusion, we identified a total of 11 mutations, reconfirming the genetic heterogeneity of CYP1B1 in the pathogenesis of PCG. To the best of our knowledge, this is the largest study investigating the contribution of CYP1B1 to the pathogenesis of PCG in the Pakistani population.

Identifiers

PMID27508083
PMCPMC4972894
OpenAlexW2479573345

What OpenQuestion holds

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LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.