Evidence map›Paper›PMID 27507044›Full record

ArticleNature communications2016

Early programming of the oocyte epigenome temporally controls late prophase I transcription and chromatin remodelling.

Paulo Navarro-Costa, Alicia McCarthy, Pedro Prudêncio, Christina Greer, Leonardo G Guilgur, Jörg D Becker, Julie Secombe, Prashanth Rangan, Rui G Martinho

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
4.5field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
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  3. Journal of developmental biology · 2025
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  7. Review
  8. H3K14ac facilitates the reinstallation of constitutive heterochromatin inProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
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  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Genetic and Epigenetic Regulation ofJournal of developmental biology · 2023
    Review
  17. Article
  18. Article
  19. Polycomb group (PcG) proteins prevent the assembly of abnormal synaptonemal complex structures during meiosis.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Paulo Navarro-CostaDepartamento de Ciências Biomédicas e Medicina, and Center for Biomedical Research, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal.
Alicia McCarthyDepartment of Biological Sciences/RNA Institute, University at Albany SUNY, Albany, New York 12222, USA.
Pedro PrudêncioDepartamento de Ciências Biomédicas e Medicina, and Center for Biomedical Research, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal.
Christina GreerDepartment of Genetics, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Leonardo G GuilgurDepartamento de Ciências Biomédicas e Medicina, and Center for Biomedical Research, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal.
Jörg D BeckerInstituto Gulbenkian de Ciência, 2780-156 Oeiras, Portugal.
Julie SecombeDepartment of Genetics, Albert Einstein College of Medicine, Bronx, New York 10461, USA.
Prashanth RanganDepartment of Biological Sciences/RNA Institute, University at Albany SUNY, Albany, New York 12222, USA.
Rui G MartinhoDepartamento de Ciências Biomédicas e Medicina, and Center for Biomedical Research, Universidade do Algarve, Campus de Gambelas, 8005-139 Faro, Portugal.ORCID 0000-0002-1641-3403
Instituto Gulbenkian de Ciência · PTAlbert Einstein College of Medicine · USUniversity at Albany, State University of New York · US

Funding

Drosophila Transgenic RNAi Resource ProjectR01GM084947 · NIGMS · HARVARD MEDICAL SCHOOL · PI PERRIMON, NORBERT · 2008 to 2019
$9.8M
Distinct Modes of Gene Regulation by KDM5R01GM112783 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SECOMBE, JULIE · 2015 to 2023
$3.0M
Regulation of stem cell differentiation during Drosophila oogenesisR01GM111779 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI RANGAN, PRASHANTH · 2014 to 2022
$2.7M
NIGMS NIH HHS R01 GM084947NIGMS NIH HHS R01 GM111779NIGMS NIH HHS R01 GM112783
6 · The paper itself

Abstract

Oocytes are arrested for long periods of time in the prophase of the first meiotic division (prophase I). As chromosome condensation poses significant constraints to gene expression, the mechanisms regulating transcriptional activity in the prophase I-arrested oocyte are still not entirely understood. We hypothesized that gene expression during the prophase I arrest is primarily epigenetically regulated. Here we comprehensively define the Drosophila female germ line epigenome throughout oogenesis and show that the oocyte has a unique, dynamic and remarkably diversified epigenome characterized by the presence of both euchromatic and heterochromatic marks. We observed that the perturbation of the oocyte's epigenome in early oogenesis, through depletion of the dKDM5 histone demethylase, results in the temporal deregulation of meiotic transcription and affects female fertility. Taken together, our results indicate that the early programming of the oocyte epigenome primes meiotic chromatin for subsequent functions in late prophase I.

Indexed as

AnimalsChromatinChromatin Assembly and DisassemblyDNA DemethylationDrosophilaDrosophila ProteinsEpigenesis, GeneticFemaleFertilityHistone DemethylasesHistonesMeiotic Prophase IOocytesOogenesisChromatinDrosophila ProteinsHistone DemethylasesHistonesLid protein, Drosophila

Identifiers

PMID27507044
PMCPMC4987523
OpenAlexW2488747098

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.