Evidence map›Paper›PMID 27504748›Full record

ArticleACS chemical neuroscience2016

Analysis of a Nitroreductase-Based Hypoxia Sensor in Primary Neuronal Cultures.

Britney N Lizama-Manibusan, Sharon Klein, Jennifer R McKenzie, David E Cliffel, BethAnn McLaughlin

Open access · greenAbstract read
In one paragraph

Article in ACS chemical neuroscience, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
2.1field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Multianalyte Physiological Microanalytical Devices.Annual review of analytical chemistry (Palo Alto, Calif.) · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Britney N Lizama-ManibusanVanderbilt Neuroscience Graduate Program, ‡Departments of Chemistry, §Neurology, and ∥Pharmacology, Vanderbilt University , Nashville, Tennessee 37232, United States.
Sharon KleinVanderbilt Neuroscience Graduate Program, ‡Departments of Chemistry, §Neurology, and ∥Pharmacology, Vanderbilt University , Nashville, Tennessee 37232, United States.
Jennifer R McKenzieVanderbilt Neuroscience Graduate Program, ‡Departments of Chemistry, §Neurology, and ∥Pharmacology, Vanderbilt University , Nashville, Tennessee 37232, United States.
David E CliffelVanderbilt Neuroscience Graduate Program, ‡Departments of Chemistry, §Neurology, and ∥Pharmacology, Vanderbilt University , Nashville, Tennessee 37232, United States.
BethAnn McLaughlinVanderbilt Neuroscience Graduate Program, ‡Departments of Chemistry, §Neurology, and ∥Pharmacology, Vanderbilt University , Nashville, Tennessee 37232, United States.
Vanderbilt University · US

Funding

Protein Adducts and Proteome Profiles in Oxidative StressP01ES013125 · NIEHS · VANDERBILT UNIVERSITY · PI PORTER, NED ALLEN · 2005 to 2012
$12.6M
Neurovascular Unit on a Chip: Chemical Communication, Drug and Toxin ResponsesUH2TR000491 · NCATS · VANDERBILT UNIVERSITY · PI JANIGRO, DAMIR, NISWENDER, KEVIN D · 2012 to 2013
$2.2M
ASK signalosomes and environmental sensingR01ES022936 · NIEHS · VANDERBILT UNIVERSITY MEDICAL CENTER · PI MCLAUGHLIN, BETHANN M · 2014 to 2018
$1.8M
CELLULAR AND MOLECULAR NEUROSCIENCE TRAININGT32MH019732 · NIMH · VANDERBILT UNIVERSITY · PI BLAKELY, RANDY D · 1992 to 2001
$284k
NCATS NIH HHS UH2 TR000491NIEHS NIH HHS P01 ES013125NIEHS NIH HHS R01 ES022936NIMH NIH HHS T32 MH019732
6 · The paper itself

Abstract

The ability to assess oxygenation within living cells is much sought after to more deeply understand normal and pathological cell biology. Hypoxia Red manufactured by Enzo Life Sciences is advertised as a novel hypoxia detector dependent on nitroreducatase activity. We sought to use Hypoxia Red in primary neuronal cultures to test cell-to-cell metabolic variability in response to hypoxic stress. Neurons treated with 90 min of hypoxia were labeled with Hypoxia Red. We observed that, even under normoxic conditions neurons expressed fluorescence robustly. Analysis of the chemical reactions and biological underpinnings of this method revealed that the high uptake and reduction of the dye is due to active nitroreductases in normoxic cells that are independent of oxygen availability.

Indexed as

AnimalsBasic Helix-Loop-Helix ProteinsCell CountCell HypoxiaCells, CulturedEmbryo, MammalianEndothelial PAS Domain-Containing Protein 1GlucoseMicrotubule-Associated ProteinsNeurogliaNeuronsNitroreductasesOxygenProsencephalonRatsRats, Sprague-DawleyBasic Helix-Loop-Helix ProteinsEndothelial PAS Domain-Containing Protein 1GlucoseMAP2 protein, ratMicrotubule-Associated ProteinsNitroreductasesOxygenTubulinFluorescencehypoxianitroreductaseoxygenoxygen and glucose deprivation

Identifiers

PMID27504748
PMCPMC5125302
OpenAlexW2512248521

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.