Evidence map›Paper›PMID 27503894›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Salmonella Typhimurium utilizes a T6SS-mediated antibacterial weapon to establish in the host gut.

Thibault G Sana, Nicolas Flaugnatti, Kyler A Lugo, Lilian H Lam, Amanda Jacobson, Virginie Baylot, Eric Durand, Laure Journet, Eric Cascales, Denise M Monack

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 227 papers.

0numbers the graph read from it
0cells of the map it votes in
227citing papers in PubMed
30.0field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

227 citing papers in PubMed, 334 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. The Manipulation of Host Cells byInternational journal of molecular sciences · 2026
    Review
  6. Review
  7. Article
  8. Type VI Secretion Systems inMicroorganisms · 2026
    Article
  9. Divergent roles ofMicrobiology spectrum · 2026
    Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. The SPI-6 T6SS gene cluster fromFrontiers in microbiology · 2026
    Article
  18. Article
  19. Tldi1 deficiency mediates Tlde1 self-toxic effect to regulate the adaptability ofFrontiers in cellular and infection microbiology · 2026
    Article
  20. The SPI-20 and SPI-21 T6SS gene clusters fromFrontiers in microbiology · 2026
    Article

167 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Thibault G SanaDepartment of Microbiology and Immunology, Stanford School of Medicine, Stanford University, Stanford, CA 94305;ORCID 0000-0003-0723-6924
Nicolas FlaugnattiLaboratoire d'Ingénierie des Systèmes Macromoléculaires (UMR7255), Institut de Microbiologie de la Méditerranée, Aix-Marseille Université - CNRS, 13402 Marseille, France;
Kyler A LugoDepartment of Microbiology and Immunology, Stanford School of Medicine, Stanford University, Stanford, CA 94305;
Lilian H LamDepartment of Microbiology and Immunology, Stanford School of Medicine, Stanford University, Stanford, CA 94305;
Amanda JacobsonDepartment of Microbiology and Immunology, Stanford School of Medicine, Stanford University, Stanford, CA 94305;
Virginie BaylotDivision of Oncology, Department of Medicine and Pathology, Stanford School of Medicine, Stanford University, Stanford, CA 94305.
Eric DurandLaboratoire d'Ingénierie des Systèmes Macromoléculaires (UMR7255), Institut de Microbiologie de la Méditerranée, Aix-Marseille Université - CNRS, 13402 Marseille, France;
Laure JournetLaboratoire d'Ingénierie des Systèmes Macromoléculaires (UMR7255), Institut de Microbiologie de la Méditerranée, Aix-Marseille Université - CNRS, 13402 Marseille, France;
Eric CascalesLaboratoire d'Ingénierie des Systèmes Macromoléculaires (UMR7255), Institut de Microbiologie de la Méditerranée, Aix-Marseille Université - CNRS, 13402 Marseille, France;
Denise M MonackDepartment of Microbiology and Immunology, Stanford School of Medicine, Stanford University, Stanford, CA 94305; dmonack@stanford.edu.
Stanford University · USCentre National de la Recherche Scientifique · FR

Funding

Supplement to Enhance Wellness and Resiliency in the Graduate EnvironmentT32GM007276 · NIGMS · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 1985 to 2023
$32.9M
MOLECULAR BASIS OF HOST-PARASITE INTERACTIONT32AI007328 · NIAID · STANFORD UNIVERSITY · PI JUSTIN L SONNENBURG · 1987 to 2026
$11.9M
Mechanisms of persistent Salmonella infectionR01AI116059 · NIAID · STANFORD UNIVERSITY · PI MONACK, DENISE M · 2015 to 2025
$4.6M
NIAID NIH HHS R01 AI116059NIAID NIH HHS T32 AI007328NIGMS NIH HHS T32 GM007276
6 · The paper itself

Abstract

The mammalian gastrointestinal tract is colonized by a high-density polymicrobial community where bacteria compete for niches and resources. One key competition strategy includes cell contact-dependent mechanisms of interbacterial antagonism, such as the type VI secretion system (T6SS), a multiprotein needle-like apparatus that injects effector proteins into prokaryotic and/or eukaryotic target cells. However, the contribution of T6SS antibacterial activity during pathogen invasion of the gut has not been demonstrated. We report that successful establishment in the gut by the enteropathogenic bacterium Salmonella enterica serovar Typhimurium requires a T6SS encoded within Salmonella pathogenicity island-6 (SPI-6). In an in vitro setting, we demonstrate that bile salts increase SPI-6 antibacterial activity and that S Typhimurium kills commensal bacteria in a T6SS-dependent manner. Furthermore, we provide evidence that one of the two T6SS nanotube subunits, Hcp1, is required for killing Klebsiella oxytoca in vitro and that this activity is mediated by the specific interaction of Hcp1 with the antibacterial amidase Tae4. Finally, we show that K. oxytoca is killed in the host gut in an Hcp1-dependent manner and that the T6SS antibacterial activity is essential for Salmonella to establish infection within the host gut. Our findings provide an example of pathogen T6SS-dependent killing of commensal bacteria as a mechanism to successfully colonize the host gut.

Indexed as

AntibiosisAnimalsBacterial ProteinsBile Acids and SaltsCulture MediaFemaleGastrointestinal MicrobiomeGastrointestinal TractGenomic IslandsKlebsiella oxytocaMaleMiceMice, Inbred C57BLSalmonella Infections, AnimalSalmonella typhimuriumType VI Secretion SystemsBacterial ProteinsBile Acids and SaltsCulture MediaType VI Secretion SystemsVirulence Factorsantiprokaryotic activitycolonizationgut microbiotaSalmonella TyphimuriumT6SS SPI-6

Identifiers

PMID27503894
PMCPMC5003274
OpenAlexW2488719483

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.