Evidence map›Paper›PMID 27503604›Full record

ArticlePlant physiology2016

Chronic Iron Limitation Confers Transient Resistance to Oxidative Stress in Marine Diatoms.

Shiri Graff van Creveld, Shilo Rosenwasser, Yishai Levin, Assaf Vardi

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 26 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Shiri Graff van CreveldDepartment of Plant and Environmental Sciences (S.G.v.C., S.R., A.V.),and Israel National Center for Personalized Medicine (Y.L.), Weizmann Institute of Science, Rehovot 7610001, Israel.
Shilo RosenwasserDepartment of Plant and Environmental Sciences (S.G.v.C., S.R., A.V.),and Israel National Center for Personalized Medicine (Y.L.), Weizmann Institute of Science, Rehovot 7610001, Israel.
Yishai LevinDepartment of Plant and Environmental Sciences (S.G.v.C., S.R., A.V.),and Israel National Center for Personalized Medicine (Y.L.), Weizmann Institute of Science, Rehovot 7610001, Israel.ORCID 0000-0002-7279-0246
Assaf VardiDepartment of Plant and Environmental Sciences (S.G.v.C., S.R., A.V.),and Israel National Center for Personalized Medicine (Y.L.), Weizmann Institute of Science, Rehovot 7610001, Israel.
Planta · RUWeizmann Institute of Science · IL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diatoms are single-celled, photosynthetic, bloom-forming algae that are responsible for at least 20% of global primary production. Nevertheless, more than 30% of the oceans are considered "ocean deserts" due to iron limitation. We used the diatom Phaeodactylum tricornutum as a model system to explore diatom's response to iron limitation and its interplay with susceptibility to oxidative stress. By analyzing physiological parameters and proteome profiling, we defined two distinct phases: short-term (<3 d, phase I) and chronic (>5 d, phase II) iron limitation. While at phase I no significant changes in physiological parameters were observed, molecular markers for iron starvation, such as Iron Starvation Induced Protein and flavodoxin, were highly up-regulated. At phase II, down-regulation of numerous iron-containing proteins was detected in parallel to reduction in growth rate, chlorophyll content, photosynthetic activity, respiration rate, and antioxidant capacity. Intriguingly, while application of oxidative stress to phase I and II iron-limited cells similarly oxidized the reduced glutathione (GSH) pool, phase II iron limitation exhibited transient resistance to oxidative stress, despite the down regulation of many antioxidant proteins. By comparing proteomic profiles of P. tricornutum under iron limitation and metatranscriptomic data of an iron enrichment experiment conducted in the Pacific Ocean, we propose that iron-limited cells in the natural environment resemble the phase II metabolic state. These results provide insights into the trade-off between optimal growth rate and susceptibility to oxidative stress in the response of diatoms to iron quota in the marine environment.

Indexed as

Adaptation, PhysiologicalAntioxidantsChlorophyllDiatomsFlavodoxinGene Expression ProfilingGene OntologyGlutathioneHydrogen PeroxideIronMass SpectrometryOceans and SeasOxidantsOxidation-ReductionOxidative StressOxygen ConsumptionAntioxidantsChlorophyllFlavodoxinGlutathioneHydrogen PeroxideIronOxidants

Identifiers

PMID27503604
PMCPMC5047098
OpenAlexW2504989552

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.