Evidence map›Paper›PMID 27503120›Full record

ArticleBMC infectious diseases2016

Study and interest of cellular load in respiratory samples for the optimization of molecular virological diagnosis in clinical practice.

Paul Bonnin, Fabien Miszczak, Nathalie Kin, Cecile Resa, Julia Dina, Stephanie Gouarin, Florent Viron, Remy Morello, Astrid Vabret

Abstract read
In one paragraph

Article in BMC infectious diseases, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Cellular DNA quantification in respiratory samples for the normalization of viral load: a real need?Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Paul BonninNormandie University, Caen, France. paul.bonnin@hotmail.fr.
Fabien MiszczakNormandie University, Caen, France.
Nathalie KinNormandie University, Caen, France.
Cecile ResaNormandie University, Caen, France.
Julia DinaNormandie University, Caen, France.
Stephanie GouarinNormandie University, Caen, France.
Florent VironNormandie University, Caen, France.
Remy MorelloNormandie University, Caen, France.
Astrid VabretNormandie University, Caen, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundRespiratory viral diagnosis of upper respiratory tract infections has largely developed through multiplex molecular techniques. Although the sensitivity of different types of upper respiratory tract samples seems to be correlated to the number of sampled cells, this link remains largely unexplored.

methodsOur study included 800 upper respiratory tract specimens of which 400 negative and 400 positive for viral detection in multiplex PCR. All samples were selected and matched for age in these 2 groups. For the positive group, samples were selected for the detected viral species.

resultsAmong the factors influencing the cellularity were the type of sample (p < 0.0001); patient age (p < 0.001); viral positive or negative nature of the sample (p = 0.002); and, for the positive samples, the number of viral targets detected (0.004 < p < 0.049) and viral species.

conclusionThe cellular load of upper respiratory samples is multifactorial and occurs for many in the sensitivity of molecular detection. However it was not possible to determine a minimum cellularity threshold allowing molecular viral detection. The differences according to the type of virus remain to be studied on a larger scale.

Indexed as

AdolescentAdultAgedAge FactorsChildChild, PreschoolHumansMiddle AgedMultiplex Polymerase Chain ReactionNoseRespiratory Tract InfectionsSensitivity and SpecificitySpecimen HandlingVirusesYoung AdultAcute respiratory infectionsCell quantificationCellular loadNasal aspiratesNasal swabRespiratory virusVirological diagnosis

Identifiers

PMID27503120
PMCPMC4977610

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.