Evidence map›Paper›PMID 27502279›Full record

ArticleThe Journal of biological chemistry2016

Structures of Exopolysaccharides Involved in Receptor-mediated Perception of Mesorhizobium loti by Lotus japonicus.

Artur Muszyński, Christian Heiss, Christian T Hjuler, John T Sullivan, Simon J Kelly, Mikkel B Thygesen, Jens Stougaard, Parastoo Azadi, Russell W Carlson, Clive W Ronson

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
13.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 37 citations in OpenAlex.

  1. Article
  2. Review
  3. Kinetic proofreading of lipochitooligosaccharides determines signal activation of symbiotic plant receptors.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  4. Review
  5. Review
  6. Review
  7. Article
  8. Article
  9. Transcriptomic Studies Reveal that theInternational journal of molecular sciences · 2019
    Article
  10. Article
  11. Mutation in theGenes · 2018
    Article
  12. The Rhizobia-Frontiers in microbiology · 2018
    Review
  13. Review
  14. Review
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Artur MuszyńskiFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602, muszynski@ccrc.uga.edu.ORCID http://orcid.org/0000-0003-3497-9977
Christian HeissFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Christian T Hjulerthe Department of Chemistry, University of Copenhagen, 1871 Frederiksberg C, Denmark.ORCID http://orcid.org/0000-0001-6055-6391
John T Sullivanthe Department of Microbiology and Immunology, University of Otago, Dunedin 9016, New Zealand.
Simon J Kellythe Department of Microbiology and Immunology, University of Otago, Dunedin 9016, New Zealand.
Mikkel B Thygesenthe Department of Chemistry, University of Copenhagen, 1871 Frederiksberg C, Denmark.ORCID http://orcid.org/0000-0002-0158-2802
Jens Stougaardthe Department of Molecular Biology and Genetics, Aarhus University, 8000 Aarhus C, Denmark, and.ORCID http://orcid.org/0000-0002-9312-2685
Parastoo AzadiFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.ORCID http://orcid.org/0000-0002-6166-9432
Russell W CarlsonFrom the Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia 30602.
Clive W Ronsonthe Department of Microbiology and Immunology, University of Otago, Dunedin 9016, New Zealand, Clive.Ronson@otago.ac.nz.ORCID http://orcid.org/0000-0002-2217-9676
University of Georgia · USUniversity of Otago · NZUniversity of Copenhagen · DKAarhus University · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the symbiosis formed between Mesorhizobium loti strain R7A and Lotus japonicus Gifu, rhizobial exopolysaccharide (EPS) plays an important role in infection thread formation. Mutants of strain R7A affected in early exopolysaccharide biosynthetic steps form nitrogen-fixing nodules on L. japonicus Gifu after a delay, whereas mutants affected in mid or late biosynthetic steps induce uninfected nodule primordia. Recently, it was shown that a plant receptor-like kinase, EPR3, binds low molecular mass exopolysaccharide from strain R7A to regulate bacterial passage through the plant's epidermal cell layer (Kawaharada, Y., Kelly, S., Nielsen, M. W., Hjuler, C. T., Gysel, K., Muszyński, A., Carlson, R. W., Thygesen, M. B., Sandal, N., Asmussen, M. H., Vinther, M., Andersen, S. U., Krusell, L., Thirup, S., Jensen, K. J., et al. (2015) Nature 523, 308-312). In this work, we define the structure of both high and low molecular mass exopolysaccharide from R7A. The low molecular mass exopolysaccharide produced by R7A is a monomer unit of the acetylated octasaccharide with the structure (2,3/3-OAc)β-d-RibfA-(1→4)-α-d-GlcpA-(1→4)-β-d-Glcp-(1→6)-(3OAc)β-d-Glcp-(1→6)-*[(2OAc)β-d-Glcp-(1→4)-(2/3OAc)β-d-Glcp-(1→4)-β-d-Glcp-(1→3)-β-d-Galp]. We propose it is a biosynthetic constituent of high molecular mass EPS polymer. Every new repeating unit is attached via its reducing-end β-d-Galp to C-4 of the fourth glucose (asterisked above) of the octasaccharide, forming a branch. The O-acetylation occurs on the four glycosyl residues in a non-stoichiometric ratio, and each octasaccharide subunit is on average substituted with three O-acetyl groups. The availability of these structures will facilitate studies of EPR3 receptor binding of symbiotically compatible and incompatible EPS and the positive or negative consequences on infection by the M. loti exo mutants synthesizing such EPS variants.

Indexed as

MutationCarbohydrate ConformationLotusMesorhizobiumPlant EpidermisPolysaccharides, BacterialSymbiosisPolysaccharides, Bacterialacetylationcarbohydrate structureexopolysaccharideMesorhizobium lotioctasaccharideoligosaccharidepolysacchariderhizobiariburonic acidsymbiosis

Identifiers

PMID27502279
PMCPMC5076507
OpenAlexW2493429845

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.