Evidence map›Paper›PMID 27501983›Full record

ArticleJournal of bacteriology2016

Lipogenesis and Redox Balance in Nitrogen-Fixing Pea Bacteroids.

Jason J Terpolilli, Shyam K Masakapalli, Ramakrishnan Karunakaran, Isabel U C Webb, Rob Green, Nicholas J Watmough, Nicholas J Kruger, R George Ratcliffe, Philip S Poole

Open access · bronzeAbstract read
In one paragraph

Article in Journal of bacteriology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
9.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 48 citations in OpenAlex.

  1. Regulation of central carbon metabolism and storage polymers by PTSApplied and environmental microbiology · 2026
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  3. Morphology ofPlants (Basel, Switzerland) · 2025
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  4. Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. How Rhizobia Adapt to the Nodule Environment.Journal of bacteriology · 2021
    Article
  13. Article
  14. Article
  15. Efficacy of a Plant-Microbe System:Frontiers in microbiology · 2020
    Article
  16. Article
  17. Article
  18. Rhizobia: from saprophytes to endosymbionts.Nature reviews. Microbiology · 2018
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Jason J TerpolilliCentre for Rhizobium Studies, Murdoch University, Perth, Australia Department of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom.
Shyam K MasakapalliDepartment of Plant Sciences, University of Oxford, Oxford, United Kingdom.
Ramakrishnan KarunakaranDepartment of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom.
Isabel U C WebbDepartment of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom Department of Plant Sciences, University of Oxford, Oxford, United Kingdom.
Rob GreenDepartment of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom.
Nicholas J WatmoughCentre for Molecular Structure and Biochemistry, University of East Anglia, Norwich, United Kingdom.
Nicholas J KrugerDepartment of Plant Sciences, University of Oxford, Oxford, United Kingdom.
R George RatcliffeDepartment of Plant Sciences, University of Oxford, Oxford, United Kingdom.
Philip S PooleDepartment of Molecular Microbiology, John Innes Centre, Norwich, United Kingdom Department of Plant Sciences, University of Oxford, Oxford, United Kingdom philip.poole@plants.ox.ac.uk.
John Innes Centre · GBUniversity of Oxford · GBUniversity of East Anglia · GB

Funding

Biotechnology and Biological Sciences Research Council BB/F013159/1
6 · The paper itself

Abstract

unlabelledWithin legume root nodules, rhizobia differentiate into bacteroids that oxidize host-derived dicarboxylic acids, which is assumed to occur via the tricarboxylic acid (TCA) cycle to generate NAD(P)H for reduction of N2 Metabolic flux analysis of laboratory-grown Rhizobium leguminosarum showed that the flux from [(13)C]succinate was consistent with respiration of an obligate aerobe growing on a TCA cycle intermediate as the sole carbon source. However, the instability of fragile pea bacteroids prevented their steady-state labeling under N2-fixing conditions. Therefore, comparative metabolomic profiling was used to compare free-living R. leguminosarum with pea bacteroids. While the TCA cycle was shown to be essential for maximal rates of N2 fixation, levels of pyruvate (5.5-fold reduced), acetyl coenzyme A (acetyl-CoA; 50-fold reduced), free coenzyme A (33-fold reduced), and citrate (4.5-fold reduced) were much lower in bacteroids. Instead of completely oxidizing acetyl-CoA, pea bacteroids channel it into both lipid and the lipid-like polymer poly-β-hydroxybutyrate (PHB), the latter via a type III PHB synthase that is active only in bacteroids. Lipogenesis may be a fundamental requirement of the redox poise of electron donation to N2 in all legume nodules. Direct reduction by NAD(P)H of the likely electron donors for nitrogenase, such as ferredoxin, is inconsistent with their redox potentials. Instead, bacteroids must balance the production of NAD(P)H from oxidation of acetyl-CoA in the TCA cycle with its storage in PHB and lipids. IMPORTANCE: Biological nitrogen fixation by symbiotic bacteria (rhizobia) in legume root nodules is an energy-expensive process. Within legume root nodules, rhizobia differentiate into bacteroids that oxidize host-derived dicarboxylic acids, which is assumed to occur via the TCA cycle to generate NAD(P)H for reduction of N2 However, direct reduction of the likely electron donors for nitrogenase, such as ferredoxin, is inconsistent with their redox potentials. Instead, bacteroids must balance oxidation of plant-derived dicarboxylates in the TCA cycle with lipid synthesis. Pea bacteroids channel acetyl-CoA into both lipid and the lipid-like polymer poly-β-hydroxybutyrate, the latter via a type II PHB synthase. Lipogenesis is likely to be a fundamental requirement of the redox poise of electron donation to N2 in all legume nodules.

Indexed as

LipogenesisAcetyl Coenzyme ABacterial ProteinsCarbonCitric Acid CycleHydroxybutyratesNitrogenOxidation-ReductionPisum sativumPolyestersPolyhydroxybutyratesPyruvic AcidRhizobium leguminosarumSymbiosisAcetyl Coenzyme ABacterial ProteinsCarbonHydroxybutyratesNitrogenpoly-beta-hydroxybutyratePolyestersPolyhydroxybutyratesPyruvic Acid

Identifiers

PMID27501983
PMCPMC5038014
OpenAlexW2488658326

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.