Evidence map›Paper›PMID 27501868›Full record

ArticleNature communications2016

Local adaptation of a bacterium is as important as its presence in structuring a natural microbial community.

Pedro Gómez, Steve Paterson, Luc De Meester, Xuan Liu, Luca Lenzi, M D Sharma, Kerensa McElroy, Angus Buckling

Abstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Parallel ecological and evolutionary responses to selection in a natural bacterial community.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  9. Article
  10. Evolutionary repeatability of emergent properties of ecological communities.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Rapid decline of adaptation ofBiology letters · 2022
    Article
  15. Rhizospheric bacteria as potential biocontrol agents againstSaudi journal of biological sciences · 2021
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Ecological limits to evolutionary rescue.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Pedro GómezESI and CEC, Biosciences, University of Exeter, Penryn Campus, Cornwall TR10 9FE, UK.
Steve PatersonInstitute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, UK.ORCID http://orcid.org/0000-0002-1307-2981
Luc De MeesterLaboratory of Aquatic Ecology, Evolution and Conservation, KU Leuven, 3000 Leuven, Belgium.
Xuan LiuInstitute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, UK.
Luca LenziInstitute of Integrative Biology, University of Liverpool, Liverpool L69 7ZB, UK.
M D SharmaCEC, Biosciences, University of Exeter, Penryn Campus, Cornwall TR10 9FE, UK.
Kerensa McElroyCommon wealth Scientific and Industrial Research Organisation (CSIRO), Canberra GPO Box 1700, Australia.
Angus BucklingESI and CEC, Biosciences, University of Exeter, Penryn Campus, Cornwall TR10 9FE, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Local adaptation of a species can affect community composition, yet the importance of local adaptation compared with species presence per se is unknown. Here we determine how a compost bacterial community exposed to elevated temperature changes over 2 months as a result of the presence of a focal bacterium, Pseudomonas fluorescens SBW25, that had been pre-adapted or not to the compost for 48 days. The effect of local adaptation on community composition is as great as the effect of species presence per se, with these results robust to the presence of an additional strong selection pressure: an SBW25-specific virus. These findings suggest that evolution occurring over ecological time scales can be a key driver of the structure of natural microbial communities, particularly in situations where some species have an evolutionary head start following large perturbations, such as exposure to antibiotics or crop planting and harvesting.

Indexed as

Adaptation, PhysiologicalBiodiversityCompostingGenetic FitnessPseudomonas fluorescens

Identifiers

PMID27501868
PMCPMC4980492

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.