Evidence map›Paper›PMID 27501396›Full record

ArticleNature chemical biology2016

FRET binding antenna reports spatiotemporal dynamics of GDI-Cdc42 GTPase interactions.

Louis Hodgson, Désirée Spiering, Mohsen Sabouri-Ghomi, Onur Dagliyan, Céline DerMardirossian, Gaudenz Danuser, Klaus M Hahn

Open access · greenAbstract read
In one paragraph

Article in Nature chemical biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 53 citations in OpenAlex.

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  11. A Perspective of Epigenetic Regulation in Radiotherapy.Frontiers in cell and developmental biology · 2021
    Review
  12. Article
  13. Multiplex Imaging of Rho GTPase Activities in Living Cells.Methods in molecular biology (Clifton, N.J.) · 2021
    Article
  14. Article
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  16. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Louis Hodgson *Department of Anatomy and Structural Biology and Gruss-Lipper Biophotonics Center, Albert Einstein College of Medicine.
Désirée Spiering *Department of Anatomy and Structural Biology and Gruss-Lipper Biophotonics Center, Albert Einstein College of Medicine.
Mohsen Sabouri-GhomiDepartment of Cell Biology, The Scripps Research Institute.
Onur DagliyanDepartment of Pharmacology and Lineberger Cancer Center, University of North Carolina at Chapel Hill.
Céline DerMardirossianDepartment of Immunology and Microbial Science, The Scripps Research Institute.
Gaudenz DanuserDepartment of Cell Biology, The Scripps Research Institute.
Klaus M HahnDepartment of Pharmacology and Lineberger Cancer Center, University of North Carolina at Chapel Hill.
Scripps Research Institute · USUniversity of North Carolina at Chapel Hill · USAlbert Einstein College of Medicine · US

Funding

WORD PROCESSORP30CA013330 · NCI · YESHIVA UNIVERSITY · PI THOMAS E ROHAN · 1985 to 2026
$111.2M
INTERACTIVE GRAPHICS FOR MOLECULAR STUDIES &MICROSCOPYP41EB002025 · NIBIB · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SUPERFINE, RICHARD · 2003 to 2019
$16.9M
Spatio-temporal dynamics of GEF-GTPase networksP01GM103723 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BURRIDGE, KEITH · 2013 to 2017
$5.5M
Quantitative Imaging of Signaling NetworksR01GM090317 · NIGMS · HARVARD MEDICAL SCHOOL · PI DANUSER, GAUDENZ, HAHN, KLAUS M. · 2009 to 2013
$3.4M
RhoGDI: yin and yang of RhoGTPases cycleR01GM099837 · NIGMS · SCRIPPS RESEARCH INSTITUTE, THE · PI DERMARDIROSSIAN, CELINE · 2012 to 2016
$1.8M
Rac1 regulates protrusion and invasion of breast cancers in 3DR21CA181838 · NCI · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI HODGSON, LOUIS · 2014 to 2015
$400k
Howard Hughes Medical InstituteNCI NIH HHS P30 CA013330NCI NIH HHS R21 CA181838NIBIB NIH HHS P41 EB002025NIGMS NIH HHS P01 GM103723NIGMS NIH HHS R01 GM090317NIGMS NIH HHS R01 GM099837
6 · The paper itself

Abstract

Guanine-nucleotide dissociation inhibitors (GDIs) are negative regulators of Rho family GTPases that sequester the GTPases away from the membrane. Here we ask how GDI-Cdc42 interaction regulates localized Cdc42 activation for cell motility. The sensitivity of cells to overexpression of Rho family pathway components led us to a new biosensor, GDI.Cdc42 FLARE, in which Cdc42 is modified with a fluorescence resonance energy transfer (FRET) 'binding antenna' that selectively reports Cdc42 binding to endogenous GDIs. Similar antennae could also report GDI-Rac1 and GDI-RhoA interaction. Through computational multiplexing and simultaneous imaging, we determined the spatiotemporal dynamics of GDI-Cdc42 interaction and Cdc42 activation during cell protrusion and retraction. This revealed remarkably tight coordination of GTPase release and activation on a time scale of 10 s, suggesting that GDI-Cdc42 interactions are a critical component of the spatiotemporal regulation of Cdc42 activity, and not merely a mechanism for global sequestration of an inactivated pool of signaling molecules.

Indexed as

Fluorescence Resonance Energy TransferBinding Sitescdc42 GTP-Binding ProteinGuanine Nucleotide Dissociation InhibitorsHEK293 CellsHumansSpatio-Temporal Analysiscdc42 GTP-Binding ProteinGuanine Nucleotide Dissociation Inhibitors

Identifiers

PMID27501396
PMCPMC5030135
OpenAlexW2510142674

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.