Evidence map›Paper›PMID 27500789›Full record

ArticleInorganic chemistry2016

CO2 Reduction Catalyzed by Nitrogenase: Pathways to Formate, Carbon Monoxide, and Methane.

Nimesh Khadka, Dennis R Dean, Dayle Smith, Brian M Hoffman, Simone Raugei, Lance C Seefeldt

Open access · greenAbstract read
In one paragraph

Article in Inorganic chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 54 citations in OpenAlex.

  1. Review
  2. Selective COACS catalysis · 2026
    Article
  3. Reductant- or Light-Driven ATP-Independent Reduction of COChembiochem : a European journal of chemical biology · 2025
    Article
  4. Biomimetic [MFeInorganic chemistry · 2025
    Article
  5. Article
  6. Structural insights into the iron nitrogenase complex.Nature structural & molecular biology · 2024
    Article
  7. Review
  8. Engineering an Oxygen-Binding Protein for Photocatalytic COAngewandte Chemie (International ed. in English) · 2023
    Article
  9. Article
  10. The Conversion of Carbon Monoxide and Carbon Dioxide by Nitrogenases.Chembiochem : a European journal of chemical biology · 2022
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Influence of Energy and Electron Availability onApplied and environmental microbiology · 2019
    Article
  17. Article
  18. Critical computational analysis illuminates the reductive-elimination mechanism that activates nitrogenase for NProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  19. Review
  20. Mechanism of Nitrogenase HJournal of the American Chemical Society · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Nimesh KhadkaDepartment of Chemistry and Biochemistry, Utah State University , Logan, Utah 84322, United States.
Dennis R DeanDepartment of Biochemistry, Virginia Tech , Blacksburg, Virginia 24061, United States.
Dayle SmithIntel Corporation , Hillsboro, Oregon 97124, United States.
Brian M HoffmanDepartment of Chemistry, Northwestern University , Evanston, Illinois 60208, United States.
Simone RaugeiPacific Northwestern National Laboratory , Richland, Washington 99352, United States.
Lance C SeefeldtDepartment of Chemistry and Biochemistry, Utah State University , Logan, Utah 84322, United States.
Utah State University · USIntel (United States) · USNorthwestern University · USPacific Northwest National Laboratory · USVirginia Tech · US

Funding

Coboglobins-Cobalt-Substituted Hemoglobins and MyoglobinR01GM111097 · NIGMS · NORTHWESTERN UNIVERSITY · PI HOFFMAN, BRIAN M · 2014 to 2025
$6.7M
NIGMS NIH HHS R01 GM111097
6 · The paper itself

Abstract

The reduction of N2 to NH3 by Mo-dependent nitrogenase at its active-site metal cluster FeMo-cofactor utilizes reductive elimination of Fe-bound hydrides with obligatory loss of H2 to activate the enzyme for binding/reduction of N2. Earlier work showed that wild-type nitrogenase and a nitrogenase with amino acid substitutions in the MoFe protein near FeMo-cofactor can catalytically reduce CO2 by two or eight electrons/protons to carbon monoxide (CO) and methane (CH4) at low rates. Here, it is demonstrated that nitrogenase preferentially reduces CO2 by two electrons/protons to formate (HCOO(-)) at rates >10 times higher than rates of CO2 reduction to CO and CH4. Quantum mechanical calculations on the doubly reduced FeMo-cofactor with a Fe-bound hydride and S-bound proton (E2(2H) state) favor a direct reaction of CO2 with the hydride ("direct hydride transfer" reaction pathway), with facile hydride transfer to CO2 yielding formate. In contrast, a significant barrier is observed for reaction of Fe-bound CO2 with the hydride ("associative" reaction pathway), which leads to CO and CH4. Remarkably, in the direct hydride transfer pathway, the Fe-H behaves as a hydridic hydrogen, whereas in the associative pathway it acts as a protic hydrogen. MoFe proteins with amino acid substitutions near FeMo-cofactor (α-70(Val→Ala), α-195(His→Gln)) are found to significantly alter the distribution of products between formate and CO/CH4.

Indexed as

Azotobacter vinelandiiCarbon DioxideCarbon MonoxideFormatesMethaneMolybdoferredoxinNitrogenaseOxidation-ReductionCarbon DioxideCarbon MonoxideFormatesformic acidMethaneMolybdoferredoxinNitrogenase

Identifiers

PMID27500789
PMCPMC5068488
OpenAlexW2514312175

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.