Evidence map›Paper›PMID 27499874›Full record

ArticleRegeneration (Oxford, England)2015

Positional information in axolotl and mouse limb extracellular matrix is mediated via heparan sulfate and fibroblast growth factor during limb regeneration in the axolotl (Ambystoma mexicanum).

Anne Q Phan, Jangwoo Lee, Michelle Oei, Craig Flath, Caitlyn Hwe, Rachele Mariano, Tiffany Vu, Cynthia Shu, Andrew Dinh, Jennifer Simkin and 3 more

Open access · hybridAbstract read
In one paragraph

Article in Regeneration (Oxford, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 66 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. The Accessory Limb Model Regenerative Assay and Its Derivatives.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  5. Article
  6. Toeing the line between regeneration and fibrosis.Frontiers in cell and developmental biology · 2023
    Review
  7. Article
  8. Manipulating the microbiome alters regenerative outcomes in Xenopus laevis tadpoles via lipopolysaccharide signalling.Wound repair and regeneration : official publication of the Wound Healing Society [and] the European Tissue Repair Society · 2022
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Characterizing the regenerative capacity and growth patterns of the Texas blind salamander (Eurycea rathbuni).Developmental dynamics : an official publication of the American Association of Anatomists · 2021
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Anne Q PhanDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
Jangwoo LeeDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
Michelle OeiDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
Craig FlathDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
Caitlyn HweDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
Rachele MarianoDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
Tiffany VuDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
Cynthia ShuDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
Andrew DinhDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
Jennifer SimkinDepartment of Cell and Molecular Biology Tulane University New Orleans Louisiana 70118, USA.
Ken MuneokaDepartment of Cell and Molecular Biology Tulane University New Orleans Louisiana 70118, USA.
Susan V BryantDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
David M GardinerDepartment of Developmental and Cell Biology University of California Irvine Irvine California 92697-2305 USA.
University of California, Irvine · USTulane University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Urodele amphibians are unique among adult vertebrates in their ability to regenerate complex body structures after traumatic injury. In salamander regeneration, the cells maintain a memory of their original position and use this positional information to recreate the missing pattern. We used an in vivo gain-of-function assay to determine whether components of the extracellular matrix (ECM) have positional information required to induce formation of new limb pattern during regeneration. We discovered that salamander limb ECM has a position-specific ability to either inhibit regeneration or induce de novo limb structure, and that this difference is dependent on heparan sulfates that are associated with differential expression of heparan sulfate sulfotransferases. We also discovered that an artificial ECM containing only heparan sulfate was sufficient to induce de novo limb pattern in salamander limb regeneration. Finally, ECM from mouse limbs is capable of inducing limb pattern in axolotl blastemas in a position-specific, developmental-stage-specific, and heparan sulfate-dependent manner. This study demonstrates a mechanism for positional information in regeneration and establishes a crucial functional link between salamander regeneration and mammals.

Indexed as

axolotlECMheparan sulfatepattern formationpositional information

Identifiers

PMID27499874
PMCPMC4857728
OpenAlexW2151734306

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.