Evidence map›Paper›PMID 27499866›Full record

ArticleRegeneration (Oxford, England)2015

TALEN-mediated gene editing of the thrombospondin-1 locus in axolotl.

Tzu-Hsing Kuo, Johanna E Kowalko, Tia DiTommaso, Mandi Nyambi, Daniel T Montoro, Jeffrey J Essner, Jessica L Whited

Open access · hybridAbstract read
In one paragraph

Article in Regeneration (Oxford, England), 2015. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

  1. The use of transgenics in the laboratory axolotl.Developmental dynamics : an official publication of the American Association of Anatomists · 2022
    Review
  2. Towards comparative analyses of salamander limb regeneration.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2021
    Review
  3. Article
  4. Article
  5. Advances in Decoding Axolotl Limb Regeneration.Trends in genetics : TIG · 2017
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 1 country.

Tzu-Hsing KuoBrigham Regenerative Medicine Center and Department of Orthopedic Surgery Brigham and Women's Hospital Harvard Medical School Harvard Stem Cell Institute Cambridge Massachusetts 02139 USA.
Johanna E KowalkoDepartment of Genetics Development and Cell Biology Iowa State University Ames Iowa 50011 USA.
Tia DiTommasoBrigham Regenerative Medicine Center and Department of Orthopedic Surgery Brigham and Women's Hospital Harvard Medical School Harvard Stem Cell Institute Cambridge Massachusetts 02139 USA.
Mandi NyambiBrigham Regenerative Medicine Center and Department of Orthopedic Surgery Brigham and Women's Hospital Harvard Medical School Harvard Stem Cell Institute Cambridge Massachusetts 02139 USA.
Daniel T MontoroBrigham Regenerative Medicine Center and Department of Orthopedic Surgery Brigham and Women's Hospital Harvard Medical School Harvard Stem Cell Institute Cambridge Massachusetts 02139 USA.
Jeffrey J EssnerDepartment of Genetics Development and Cell Biology Iowa State University Ames Iowa 50011 USA.
Jessica L WhitedBrigham Regenerative Medicine Center and Department of Orthopedic Surgery Brigham and Women's Hospital Harvard Medical School Harvard Stem Cell Institute Cambridge Massachusetts 02139 USA.
Brigham and Women's Hospital · USHarvard Stem Cell Institute · USIowa State University · USHarvard University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Loss-of-function genetics provides strong evidence for a gene's function in a wild-type context. In many model systems, this approach has been invaluable for discovering the function of genes in diverse biological processes. Axolotls are urodele amphibians (salamanders) with astonishing regenerative abilities, capable of regenerating entire limbs, portions of the tail (including spinal cord), heart, and brain into adulthood. With their relatively short generation time among salamanders, they offer an outstanding opportunity to interrogate natural mechanisms for appendage and organ regeneration provided that the tools are developed to address these long-standing questions. Here we demonstrate targeted modification of the thrombospondin-1 (tsp-1) locus using transcription-activator-like effector nucleases (TALENs) and identify a role of tsp-1 in recruitment of myeloid cells during limb regeneration. We find that while tsp-1-edited mosaic animals still regenerate limbs, they exhibit a reduced subepidermal collagen layer in limbs and an increased number of myeloid cells within blastemas. This work presents a protocol for generating and genotyping mosaic axolotls with TALEN-mediated gene edits.

Indexed as

Axolotlgene targetinggenome editinglimbregenerationTALENthrombospondin‐1

Identifiers

PMID27499866
PMCPMC4895330
OpenAlexW1895515882

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.