Evidence map›Paper›PMID 27499827›Full record

ArticleStandards in genomic sciences2016

Draft genomic sequence of a chromate- and sulfate-reducing Alishewanella strain with the ability to bioremediate Cr and Cd contamination.

Xian Xia, Jiahong Li, Shuijiao Liao, Gaoting Zhou, Hui Wang, Liqiong Li, Biao Xu, Gejiao Wang

Abstract readCase Reports
In one paragraph

Article in Standards in genomic sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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  7. The CytochromeFrontiers in microbiology · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xian XiaState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070 People's Republic of China.
Jiahong LiState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070 People's Republic of China.
Shuijiao LiaoState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070 People's Republic of China ; College of Basic Sciences, Huazhong Agricultural University, Wuhan, 430070 People's Republic of China.
Gaoting ZhouState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070 People's Republic of China ; College of Basic Sciences, Huazhong Agricultural University, Wuhan, 430070 People's Republic of China.
Hui WangState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070 People's Republic of China.
Liqiong LiState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070 People's Republic of China.
Biao XuState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070 People's Republic of China.
Gejiao WangState Key Laboratory of Agricultural Microbiology, Huazhong Agricultural University, Wuhan, 430070 People's Republic of China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Alishewanella sp. WH16-1 (= CCTCC M201507) is a facultative anaerobic, motile, Gram-negative, rod-shaped bacterium isolated from soil of a copper and iron mine. This strain efficiently reduces chromate (Cr(6+)) to the much less toxic Cr(3+). In addition, it reduces sulfate (SO4 (2-)) to S(2-). The S(2-) could react with Cd(2+) to generate precipitated CdS. Thus, strain WH16-1 shows a great potential to bioremediate Cr and Cd contaimination. Here we describe the features of this organism, together with the draft genome and comparative genomic results among strain WH16-1 and other Alishewanella strains. The genome comprises 3,488,867 bp, 50.4 % G + C content, 3,132 protein-coding genes and 80 RNA genes. Both putative chromate- and sulfate-reducing genes are identified.

Indexed as

AlishewanellaCadmiumChromate-reducing bacteriumChromiumSulfate-reducing bacterium

Identifiers

PMID27499827
PMCPMC4974768

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.