Evidence map›Paper›PMID 27499296›Full record

ArticleMolecular cell2016

Mitochondrial Protein Interaction Mapping Identifies Regulators of Respiratory Chain Function.

Brendan J Floyd, Emily M Wilkerson, Mike T Veling, Catie E Minogue, Chuanwu Xia, Emily T Beebe, Russell L Wrobel, Holly Cho, Laura S Kremer, Charlotte L Alston and 14 more

Abstract read
In one paragraph

Article in Molecular cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 172 papers.

0numbers the graph read from it
0cells of the map it votes in
172citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

172 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Functional Diversity and Emerging Roles of Human NME/NDPK Group II Proteins.International journal of molecular sciences · 2026
    Review
  9. Article
  10. Cooperative Architecture of Mitochondrial Proteome Homeostasis.medRxiv : the preprint server for health sciences · 2026
    Article
  11. Article
  12. MS-Based Proteomics Approach in Mapping Protein-Protein Interaction.Advances in experimental medicine and biology · 2026
    Review
  13. Article
  14. Article
  15. Article
  16. Loss of STARD7 Triggers Metabolic Reprogramming and Cell Cycle Arrest in Breast Cancer.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2025
    Article
  17. Review
  18. Review
  19. Article
  20. Article

112 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Brendan J FloydMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Emily M WilkersonDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Mike T VelingMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Catie E MinogueDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Chuanwu XiaDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Emily T BeebeDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Russell L WrobelDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Holly ChoMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Laura S KremerInstitute of Human Genetics, Technische Universität München, 81675 München, Germany; Institute of Human Genetics, Helmholtz Zentrum München, 85764 Neuherberg, Germany.
Charlotte L AlstonWellcome Trust Centre for Mitochondrial Research, Institute of Neuroscience, The Medical School, Newcastle University, Newcastle upon Tyne NE2 4HH, UK.
Katarzyna A GromekDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Brendan K DolanDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Arne UlbrichDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Jonathan A StefelyMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Sarah L BohlMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Kelly M WernerDepartment of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA.
Adam JochemMorgridge Institute for Research, Madison, WI 53715, USA.
Michael S WestphallGenome Center of Wisconsin, University of Wisconsin-Madison, Madison, WI 53706, USA.
Jarred W RensvoldMorgridge Institute for Research, Madison, WI 53715, USA.
Robert W TaylorWellcome Trust Centre for Mitochondrial Research, Institute of Neuroscience, The Medical School, Newcastle University, Newcastle upon Tyne NE2 4HH, UK.
Holger ProkischInstitute of Human Genetics, Technische Universität München, 81675 München, Germany; Institute of Human Genetics, Helmholtz Zentrum München, 85764 Neuherberg, Germany.
Jung-Ja P KimDepartment of Biochemistry, Medical College of Wisconsin, Milwaukee, WI 53226, USA.
Joshua J CoonDepartment of Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA; Department of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, WI 53706, USA; Genome Center of Wisconsin, University of Wisconsin-Madison, Madison, WI 53706, USA.
David J PagliariniMorgridge Institute for Research, Madison, WI 53715, USA; Department of Biochemistry, University of Wisconsin-Madison, Madison, WI 53706, USA. Electronic address: dpagliarini@morgridge.org.

Funding

Research Training for Computation and Informatics in Biology and MedicineT15LM007359 · NLM · UNIVERSITY OF WISCONSIN-MADISON · PI Mark W. Craven, Colin Noel Dewey · 2002 to 2026
$22.6M
GRADUATE TRAINING IN MOLECULAR BIOSCIENCEST32GM007215 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI HULL, CHRISTINA M · 1985 to 2018
$22.5M
INTEGRATED TRAINING FOR PHYSICIAN-SCIENTISTST32GM008692 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI BURKARD, MARK E · 1998 to 2020
$10.3M
TRAINING IN NUTRITIONT32DK007665 · NIDDK · UNIVERSITY OF WISCONSIN-MADISON · PI GUY E GROBLEWSKI, Chi- Liang Eric Yen · 1993 to 2026
$9.2M
Structure, Function and Regulation of the ProteomeR35GM118110 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI COON, JOSHUA J · 2016 to 2025
$9.1M
RESEARCH TRAINING IN HEMATOLOGYT32HL007899 · NHLBI · UNIVERSITY OF WISCONSIN-MADISON · PI Jane Ellen Churpek · 1998 to 2026
$8.2M
Partnership for High-Throughput Enabled Biology of the Mitochondrial ProteomeU01GM094622 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI MARKLEY, JOHN LUTE · 2010 to 2014
$7.8M
Regulation of Mitochondrial Metabolism by Post-Translational ModificationsR01DK098672 · NIDDK · WASHINGTON UNIVERSITY · PI David J Pagliarini · 2013 to 2026
$4.8M
STRUCTURE /FUNCTION OF A FLAVOPROTEIN DEHYDROGENASER01GM029076 · NIGMS · MEDICAL COLLEGE OF WISCONSIN · PI KIM, JUNG JA P. · 1985 to 2015
$4.4M
Establishing the role of the atypical kinase ADCK3 in mitochondrial metabolismR01GM112057 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI PAGLIARINI, DAVID J · 2014 to 2017
$1.3M
Systematic functional annotation of the mitochondrial proteomeR01GM115591 · NIGMS · MORGRIDGE INSTITUTE FOR RESEARCH, INC. · PI PAGLIARINI, DAVID J · 2016 to 2018
$1.1M
Dissection of COQ8 Signaling with Mass Spectrometry and Chemical GeneticsF30AG043282 · NIA · UNIVERSITY OF WISCONSIN-MADISON · PI STEFELY, JONATHAN ALLAN · 2012 to 2014
$116k
Department of Health NIHR-HCS-D12-03-04Medical Research Council G0601943NHLBI NIH HHS T32 HL007899NIA NIH HHS F30 AG043282NIDDK NIH HHS R01 DK098672NIDDK NIH HHS T32 DK007665NIGMS NIH HHS R01 GM029076NIGMS NIH HHS R01 GM112057NIGMS NIH HHS R01 GM115591NIGMS NIH HHS R35 GM118110NIGMS NIH HHS T32 GM007215NIGMS NIH HHS T32 GM008692NIGMS NIH HHS U01 GM094622NLM NIH HHS T15 LM007359Wellcome TrustWellcome Trust 096919/Z/11/Z
6 · The paper itself

Abstract

Mitochondria are essential for numerous cellular processes, yet hundreds of their proteins lack robust functional annotation. To reveal functions for these proteins (termed MXPs), we assessed condition-specific protein-protein interactions for 50 select MXPs using affinity enrichment mass spectrometry. Our data connect MXPs to diverse mitochondrial processes, including multiple aspects of respiratory chain function. Building upon these observations, we validated C17orf89 as a complex I (CI) assembly factor. Disruption of C17orf89 markedly reduced CI activity, and its depletion is found in an unresolved case of CI deficiency. We likewise discovered that LYRM5 interacts with and deflavinates the electron-transferring flavoprotein that shuttles electrons to coenzyme Q (CoQ). Finally, we identified a dynamic human CoQ biosynthetic complex involving multiple MXPs whose topology we map using purified components. Collectively, our data lend mechanistic insight into respiratory chain-related activities and prioritize hundreds of additional interactions for further exploration of mitochondrial protein function.

Indexed as

Protein Interaction MapsDatabases, ProteinElectron Transport Chain Complex ProteinsElectron Transport Complex IHEK293 CellsHep G2 CellsHumansMitochondriaMitochondrial ProteinsProtein Interaction MappingProteomicsRNA InterferenceSignal TransductionTransfectionUbiquinoneElectron Transport Chain Complex ProteinsElectron Transport Complex IMitochondrial ProteinsUbiquinoneC15orf48C2orf47DHRS4

Identifiers

PMID27499296
PMCPMC4992456

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.