Evidence map›Paper›PMID 27498558›Full record

ArticleNature communications2016

Synthetic viability by BRCA2 and PARP1/ARTD1 deficiencies.

Xia Ding, Arnab Ray Chaudhuri, Elsa Callen, Yan Pang, Kajal Biswas, Kimberly D Klarmann, Betty K Martin, Sandra Burkett, Linda Cleveland, Stacey Stauffer and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
9.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed, 138 citations in OpenAlex.

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  12. PARP1 UFMylation ensures the stability of stalled replication forks.Proceedings of the National Academy of Sciences of the United States of America · 2024
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29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 1 country.

Xia DingMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Arnab Ray ChaudhuriLaboratory of Genome Integrity, National Cancer Institute, NIH, Bethesda, MD 20893, USA.
Elsa CallenLaboratory of Genome Integrity, National Cancer Institute, NIH, Bethesda, MD 20893, USA.
Yan PangMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Kajal BiswasMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Kimberly D KlarmannMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Betty K MartinMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Sandra BurkettMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Linda ClevelandMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Stacey StaufferMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Teresa SullivanMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Aashish DewanMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Hanna MarksMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
Anthony T TubbsLaboratory of Genome Integrity, National Cancer Institute, NIH, Bethesda, MD 20893, USA.
Nancy WongLaboratory of Genome Integrity, National Cancer Institute, NIH, Bethesda, MD 20893, USA.
Eugen BuehlerChemical Genomics Center, National Center for Advancing Translational Sciences, NIH, Rockville, MD 20850, USA.ORCID 0000-0001-7167-676X
Keiko AkagiHuman Cancer Genetics Program, The Ohio State University Comprehensive Cancer Center, Columbus, OH 43210, USA.
Scott E MartinChemical Genomics Center, National Center for Advancing Translational Sciences, NIH, Rockville, MD 20850, USA.
Jonathan R KellerMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
André NussenzweigLaboratory of Genome Integrity, National Cancer Institute, NIH, Bethesda, MD 20893, USA.
Shyam K SharanMouse Cancer Genetics Program, National Cancer Institute, NIH, Frederick, MD 21702, USA.
National Cancer Institute · USNational Human Genome Research Institute · USLeidos (United States) · USNational Center for Advancing Translational Sciences · USCancer Genetics (United States) · US

Funding

Identification of genetic interactors of BRCA2ZIABC011311 · NCI · DIVISION OF BASIC SCIENCES - NCI · PI SHARAN, SHYAM · 2010 to 2025
$13.2M
Dr. Keiko Akagi, A Bioinformatics Specialist in Cancer Genomics Research at OSU Comprehensive Cancer CenterR50CA211533 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI AKAGI, KEIKO · 2016 to 2020
$608k
NCI NIH HHS R50 CA211533
6 · The paper itself

Abstract

Poly (ADP-ribose) polymerase (PARP) inhibitor (PARPi) olaparib has been approved for treatment of advanced ovarian cancer associated with BRCA1 and BRCA2 mutations. BRCA1- and BRCA2-mutated cells, which are homologous recombination (HR) deficient, are hypersensitive to PARPi through the mechanism of synthetic lethality. Here we examine the effect of PARPi on HR-proficient cells. Olaparib pretreatment, PARP1 knockdown or Parp1 heterozygosity of Brca2(cko/ko) mouse embryonic stem cells (mESCs), carrying a null (ko) and a conditional (cko) allele of Brca2, results in viable Brca2(ko/ko) cells. PARP1 deficiency does not restore HR in Brca2(ko/ko) cells, but protects stalled replication forks from MRE11-mediated degradation through its impaired recruitment. The functional consequence of Parp1 heterozygosity on BRCA2 loss is demonstrated by a significant increase in tumorigenesis in Brca2(cko/cko) mice. Thus, while olaparib efficiently kills BRCA2-deficient cells, we demonstrate that it can also contribute to the synthetic viability if PARP is inhibited before BRCA2 loss.

Indexed as

AnimalsBRCA2 ProteinCell SurvivalDNA ReplicationHematopoietic Stem CellsHomologous RecombinationHumansIntegrasesMiceModels, BiologicalMouse Embryonic Stem CellsMRE11 Homologue ProteinPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerase InhibitorsBRCA2 ProteinBRCA2 protein, mouseCre recombinaseIntegrasesMre11a protein, mouseMRE11 Homologue ProteinParp1 protein, mousePoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerase Inhibitors

Identifiers

PMID27498558
PMCPMC4979061
OpenAlexW2515153059

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.