Evidence map›Paper›PMID 27498138›Full record

ArticleWorld journal of urology2017

Genetic variants in RNA-induced silencing complex genes and prostate cancer.

Z Nikolić, D Savić Pavićević, N Vučić, S Cerović, V Vukotić, G Brajušković

Abstract read
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In one paragraph

Article in World journal of urology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 1 synthesis or guideline pooled it, 23 citations in OpenAlex.

  1. Association of miRNA biosynthesis genesBioscience reports · 2018
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  15. Association ofOncoTargets and therapy · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Z NikolićFaculty of Biology, University of Belgrade, Belgrade, Serbia.
D Savić PavićevićFaculty of Biology, University of Belgrade, Belgrade, Serbia.
N VučićFaculty of Biology, University of Belgrade, Belgrade, Serbia.
S CerovićInstitute of Pathology, Military Medical Academy, Belgrade, Serbia.
V VukotićDepartment of Urology, Clinical Centre "dr Dragiša Mišović", Belgrade, Serbia.
G BrajuškovićFaculty of Biology, University of Belgrade, Belgrade, Serbia. brajuskovic@bio.bg.ac.rs.
University of Belgrade · RSMilitary Medical Academy · RSUniversity Hospital Center Dr Dragiša Mišović · RS

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeThe purpose of this study is to evaluate the potential association between genetic variants in genes encoding the components of RNA-induced silencing complex and prostate cancer (PCa) risk. Genetic variants chosen for this study are rs3742330 in DICER1, rs4961280 in AGO2, rs784567 in TARBP2, rs7813 in GEMIN4 and rs197414 in GEMIN3.

methodsThe study involved 355 PCa patients, 360 patients with benign prostatic hyperplasia and 318 healthy controls. For individuals diagnosed with PCa, clinicopathological characteristics including serum prostate-specific antigen level at diagnosis, Gleason score (GS) and clinical stage were determined. Genotyping was performed using high-resolution melting analysis, PCR-RFLP, TaqMan SNP Genotyping Assay and real-time PCR-based genotyping assay using specific probes. Allelic and genotypic associations were evaluated by unconditional linear and logistic regression methods.

resultsThe study provided no evidence of association between the analyzed genetic variants and PCa risk. Nevertheless, allele A of rs784567 was found to confer the reduced risk of higher serum PSA level at diagnosis (P = 0.046; Difference = -66.64, 95 % CI -131.93 to 1.35, for log-additive model). Furthermore, rs4961280, as well as rs3742330, were shown to be associated with GS. These variants, together with rs7813, were found to be associated with the lower clinical stage of PCa. Also, rs3742330 minor allele G was found to be associated with lower PCa aggressiveness (P = 0.036; OR 0.14, 95 % CI 0.023-1.22, for recessive model).

conclusionsAccording to our data, rs3742330, rs4961280 and rs7813 qualify for potentially protective genetic variants against PCa progression. These variants were not shown to be associated with PCa risk.

Indexed as

AllelesArgonaute ProteinsCase-Control StudiesDEAD Box Protein 20DEAD-box RNA HelicasesGenetic VariationHumansKallikreinsLinear ModelsLogistic ModelsMaleMinor Histocompatibility AntigensNeoplasm GradingNeoplasm StagingPolymerase Chain ReactionPolymorphism, Restriction Fragment LengthAGO2 protein, humanArgonaute ProteinsDEAD Box Protein 20DEAD-box RNA HelicasesDICER1 protein, humanGEMIN4 protein, humanKallikreinsKLK3 protein, humanMinor Histocompatibility AntigensProstate-Specific AntigenRibonuclease IIIRibonucleoproteins, Small NuclearRNA-Binding ProteinsRNA-Induced Silencing ComplexTrans-Activation Responsive RNA-Binding ProteinProstate cancerrs197414rs3742330rs4961280rs7813rs784567

Identifiers

PMID27498138
OpenAlexW2476252579

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.