Evidence map›Paper›PMID 27497606›Full record

ArticleNeuropharmacology2016

Ethanol-induced changes in poly (ADP ribose) polymerase and neuronal developmental gene expression.

David P Gavin, Handojo Kusumo, Rajiv P Sharma, Marina Guizzetti

Open access · greenAbstract read
In one paragraph

Article in Neuropharmacology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

David P GavinJesse Brown Veterans Affairs Medical Center, 820 South Damen Avenue (M/C 151), Chicago, IL 60612, USA; Center for Alcohol Research in Epigenetics, Department of Psychiatry, University of Illinois at Chicago, 1601 W. Taylor St., Chicago, IL 60612, USA. Electronic address: dgavin@psych.uic.edu.
Handojo KusumoJesse Brown Veterans Affairs Medical Center, 820 South Damen Avenue (M/C 151), Chicago, IL 60612, USA; Center for Alcohol Research in Epigenetics, Department of Psychiatry, University of Illinois at Chicago, 1601 W. Taylor St., Chicago, IL 60612, USA.
Rajiv P SharmaJesse Brown Veterans Affairs Medical Center, 820 South Damen Avenue (M/C 151), Chicago, IL 60612, USA; Center for Alcohol Research in Epigenetics, Department of Psychiatry, University of Illinois at Chicago, 1601 W. Taylor St., Chicago, IL 60612, USA.
Marina GuizzettiDepartment of Behavioral Neuroscience, Oregon Health & Science University, 3181 SW Sam Jackson Park Road L470, Portland, OR 97239, USA; VA Portland Health Care System, 3710 SW US Veterans Hospital Rd, Portland, OR 97239, USA.
University of Illinois Chicago · USVA Portland Health Care System · US

Funding

Pilot Project Program P50AA022538 · NIAAA · UNIVERSITY OF ILLINOIS AT CHICAGO · PI Elizabeth J Glover · 2015 to 2026
$21.3M
Astrocyte-neuron interactions and sulfatases in Fetal Alcohol Spectrum DisordersR01AA022948 · NIAAA · OREGON HEALTH & SCIENCE UNIVERSITY · PI GUIZZETTI, MARINA · 2015 to 2019
$1.5M
Epigenetics underlies long-term risk of relapse during abstinenceR01AA021468 · NIAAA · OREGON HEALTH & SCIENCE UNIVERSITY · PI GUIZZETTI, MARINA · 2013 to 2017
$1.5M
Mechanisms of ethanol-induced neurodevelopmental effectsR01AA017180 · NIAAA · UNIVERSITY OF WASHINGTON · PI GUIZZETTI, MARINA · 2008 to 2011
$1.2M
Effect of ethanol on chondroitin sulfate proteoglycans: relevance to FASDR21AA021876 · NIAAA · UNIVERSITY OF ILLINOIS AT CHICAGO · PI GUIZZETTI, MARINA · 2014 to 2015
$413k
Glia-neuron Interaction in Fetal Alcohol Spectrum DisordersI01BX001819 · VA · PORTLAND VA MEDICAL CENTER · PI Marina Guizzetti · 2015 to 2026
–
DNA Methylation in Ethanol Drinking BehaviorIK2BX001650 · VA · JESSE BROWN VA MEDICAL CENTER · PI GAVIN, DAVID P · 2013 to 2017
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BLRD VA I01 BX001819BLRD VA IK2 BX001650NIAAA NIH HHS P50 AA022538NIAAA NIH HHS R01 AA017180NIAAA NIH HHS R01 AA021468NIAAA NIH HHS R01 AA022948NIAAA NIH HHS R21 AA021876
6 · The paper itself

Abstract

Prenatal alcohol exposure has profound effects on neuronal growth and development. Poly-ADP Ribose Polymerase (PARP) enzymes are perhaps unique in the field of epigenetics in that they directly participate in histone modifications, transcription factor modifications, DNA methylation/demethylation and are highly inducible by ethanol. It was our hypothesis that ethanol would induce PARP enzymatic activity leading to alterations in neurodevelopmental gene expression. Mouse E18 cortical neurons were treated with ethanol, PARP inhibitors, and nuclear hormone receptor transcription factor PPARγ agonists and antagonists. Subsequently, we measured PARP activity and changes in Bdnf, OKSM (Oct4, Klf4, Sox2, c-Myc), DNA methylating/demethylating factors, and Pparγ mRNA expression, promoter 5-methylcytosine (5MC) and 5-hydroxymethylcytosine (5HMC), and PPARγ promoter binding. We found that ethanol reduced Bdnf4, 9a, and Klf4 mRNA expression, and increased c-Myc expression. These changes were reversed with a PARP inhibitor. In agreement with its role in DNA demethylation PARP inhibition increased 5MC levels at the c-Myc promoter. In addition, we found that inhibition of PARP enzymatic activity increased PPARγ promoter binding, and this corresponded to increased Bdnf and Klf4 mRNA expression. Our results suggest that PARP participates in DNA demethylation and reduces PPARγ promoter binding. The current study underscores the importance of PARP in ethanol-induced changes to neurodevelopmental gene expression.

Indexed as

AnimalsBrain-Derived Neurotrophic FactorCells, CulturedDNA MethylationEthanolFetal Alcohol Spectrum DisordersGene Expression Regulation, DevelopmentalGenes, DevelopmentalKruppel-Like Factor 4Kruppel-Like Transcription FactorsMiceNeuronsNeuroprotective AgentsPoly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) PolymerasesPPAR gammaBrain-Derived Neurotrophic FactorEthanolKlf4 protein, mouseKruppel-Like Factor 4Kruppel-Like Transcription FactorsMyc protein, mouseNeuroprotective AgentsPoly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) PolymerasesPPAR gammaProto-Oncogene Proteins c-mycRNA, MessengerAlcoholismCpGEpigeneticHistone

Identifiers

PMID27497606
PMCPMC5122454
OpenAlexW2483488835

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.