Evidence map›Paper›PMID 27497297›Full record

ArticleThe EMBO journal2016

The plant-specific CDKB1-CYCB1 complex mediates homologous recombination repair in Arabidopsis.

Annika K Weimer, Sascha Biedermann, Hirofumi Harashima, Farshad Roodbarkelari, Naoki Takahashi, Julia Foreman, Yonsheng Guan, Gaëtan Pochon, Maren Heese, Daniël Van Damme and 5 more

Open access · greenAbstract read
In one paragraph

Article in The EMBO journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 129 citations in OpenAlex.

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  14. Sugar signals pedal the cell cycle!Frontiers in plant science · 2024
    Review
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13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 8 institutions in 5 countries.

Annika K WeimerDepartment of Molecular Mechanisms of Phenotypic Plasticity, Institut de Biologie Moléculaire des Plantes du CNRS, IBMP-CNRS UPR2357, Université de Strasbourg, Strasbourg Cedex, France.
Sascha BiedermannDepartment of Molecular Mechanisms of Phenotypic Plasticity, Institut de Biologie Moléculaire des Plantes du CNRS, IBMP-CNRS UPR2357, Université de Strasbourg, Strasbourg Cedex, France.
Hirofumi HarashimaRIKEN Center for Sustainable Resource Science, Tsurumi, Yokohama, Japan.ORCID 0000-0003-3370-4111
Farshad RoodbarkelariInstitut für Biologie III, Universität Freiburg, Freiburg, Germany.
Naoki TakahashiPlant Growth Regulation Laboratory, Nara Institute of Science and Technology, Graduate School of Biological Sciences, Ikoma, Nara, Japan.
Julia ForemanSchool of Biological Sciences, University of Edinburgh, Edinburgh, UK.
Yonsheng GuanDepartment of Molecular Mechanisms of Phenotypic Plasticity, Institut de Biologie Moléculaire des Plantes du CNRS, IBMP-CNRS UPR2357, Université de Strasbourg, Strasbourg Cedex, France.
Gaëtan PochonDepartment of Developmental Biology, Biozentrum Klein Flottbek, University of Hamburg, Hamburg, Germany.
Maren HeeseDepartment of Developmental Biology, Biozentrum Klein Flottbek, University of Hamburg, Hamburg, Germany.ORCID 0000-0002-1070-9107
Daniël Van DammeDepartment of Plant Systems Biology, VIB, Ghent, Belgium Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, Belgium.
Keiko SugimotoRIKEN Center for Sustainable Resource Science, Tsurumi, Yokohama, Japan.
Csaba KonczMax-Planck-Institut für Pflanzenzüchtungsforschung, Köln, Germany.
Peter DoernerSchool of Biological Sciences, University of Edinburgh, Edinburgh, UK.
Masaaki UmedaPlant Growth Regulation Laboratory, Nara Institute of Science and Technology, Graduate School of Biological Sciences, Ikoma, Nara, Japan JST, CREST, Ikoma, Nara, Japan.
Arp SchnittgerDepartment of Molecular Mechanisms of Phenotypic Plasticity, Institut de Biologie Moléculaire des Plantes du CNRS, IBMP-CNRS UPR2357, Université de Strasbourg, Strasbourg Cedex, France Department of Developmental Biology, Biozentrum Klein Flottbek, University of Hamburg, Hamburg, Germany Trinationales Institut für Pflanzenforschung, Institut de Biologie Moléculaire des Plantes du CNRS, IBMP-CNRS, Strasbourg Cedex, France arp.schnittger@uni-hamburg.de.ORCID 0000-0001-7067-0091
Centre National de la Recherche Scientifique · FRNara Institute of Science and Technology · JPRIKEN Center for Sustainable Resource Science · JPUniversität Hamburg · DEUniversity of Edinburgh · GBGhent University · BEMax Planck Institute for Plant Breeding Research · DEUniversity of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Upon DNA damage, cyclin-dependent kinases (CDKs) are typically inhibited to block cell division. In many organisms, however, it has been found that CDK activity is required for DNA repair, especially for homology-dependent repair (HR), resulting in the conundrum how mitotic arrest and repair can be reconciled. Here, we show that Arabidopsis thaliana solves this dilemma by a division of labor strategy. We identify the plant-specific B1-type CDKs (CDKB1s) and the class of B1-type cyclins (CYCB1s) as major regulators of HR in plants. We find that RADIATION SENSITIVE 51 (RAD51), a core mediator of HR, is a substrate of CDKB1-CYCB1 complexes. Conversely, mutants in CDKB1 and CYCB1 fail to recruit RAD51 to damaged DNA CYCB1;1 is specifically activated after DNA damage and we show that this activation is directly controlled by SUPPRESSOR OF GAMMA RESPONSE 1 (SOG1), a transcription factor that acts similarly to p53 in animals. Thus, while the major mitotic cell-cycle activity is blocked after DNA damage, CDKB1-CYCB1 complexes are specifically activated to mediate HR.

Indexed as

Recombinational DNA RepairArabidopsisArabidopsis ProteinsCyclin BCyclin-Dependent KinasesRad51 RecombinaseTranscription FactorsArabidopsis ProteinsATRAD51 protein, ArabidopsisCDKA1 protein, ArabidopsisCDKB1;2 protein, ArabidopsisCycB1 protein, ArabidopsisCyclin BCyclin-Dependent KinasesRad51 RecombinaseSOG1 protein, ArabidopsisTranscription FactorsCDKcell cyclecyclinDNA damagehomologous recombination

Identifiers

PMID27497297
PMCPMC5048351
OpenAlexW2488734769

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.