Evidence map›Paper›PMID 27496777›Full record

ArticleApplied and environmental microbiology2016

Evidence for the Existence of Autotrophic Nitrate-Reducing Fe(II)-Oxidizing Bacteria in Marine Coastal Sediment.

Katja Laufer, Hans Røy, Bo Barker Jørgensen, Andreas Kappler

Open access · hybridAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
6.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 93 citations in OpenAlex.

  1. Article
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  10. Article
  11. Oligotrophic Growth of Nitrate-Dependent FeFrontiers in microbiology · 2022
    Article
  12. Article
  13. Article
  14. Meta-omics RevealApplied and environmental microbiology · 2021
    Article
  15. An evolving view on biogeochemical cycling of iron.Nature reviews. Microbiology · 2021
    Review
  16. Iron colloids dominate sedimentary supply to the ocean interior.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. Controls of HFrontiers in microbiology · 2020
    Article
  18. Article
  19. HScientific reports · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Katja LauferGeomicrobiology, Center for Applied Geosciences, University of Tübingen, Tübingen, Germany.
Hans RøyCenter for Geomicrobiology, Department of Bioscience, Aarhus University, Aarhus, Denmark.
Bo Barker JørgensenCenter for Geomicrobiology, Department of Bioscience, Aarhus University, Aarhus, Denmark.
Andreas KapplerGeomicrobiology, Center for Applied Geosciences, University of Tübingen, Tübingen, Germany Center for Geomicrobiology, Department of Bioscience, Aarhus University, Aarhus, Denmark andreas.kappler@uni-tuebingen.de.
Aarhus University · DKUniversity of Tübingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nitrate-reducing Fe(II)-oxidizing microorganisms were described for the first time ca. 20 years ago. Most pure cultures of nitrate-reducing Fe(II) oxidizers can oxidize Fe(II) only under mixotrophic conditions, i.e., when an organic cosubstrate is provided. A small number of nitrate-reducing Fe(II)-oxidizing cultures have been proposed to grow autotrophically, but unambiguous evidence for autotrophy has not always been provided. Thus, it is still unclear whether or to what extent Fe(II) oxidation coupled to nitrate reduction is an enzymatically catalyzed and energy-yielding autotrophic process or whether Fe(II) is abiotically oxidized by nitrite from heterotrophic nitrate reduction. The aim of the present study was to find evidence for the existence of autotrophic nitrate-reducing Fe(II) oxidizers in coastal marine sediments. Microcosm incubations showed that with increasing incubation times, the stoichiometric ratio of reduced nitrate/oxidized Fe(II) [NO IMPORTANCE: Twenty years after the discovery of nitrate-reducing Fe(II) oxidizers, it is still controversially discussed whether autotrophic nitrate-reducing Fe(II)-oxidizing microorganisms exist and to what extent Fe(II) oxidation in this reduction/oxidation process is enzymatically catalyzed or which role abiotic side reactions of Fe(II) with reactive N species play. Most pure cultures of nitrate-reducing Fe(II) oxidizers are mixotrophic; i.e., they need an organic cosubstrate to maintain their activity over several cultural transfers. For the few existing autotrophic isolates and enrichment cultures, either the mechanism of nitrate-reducing Fe(II) oxidation is not known or evidence for their autotrophic lifestyle is controversial. In the present study, we provide evidence for the existence of autotrophic nitrate-reducing Fe(II) oxidizers in coastal marine sediments. The evidence is based on stoichiometries of nitrate reduction and Fe(II) oxidation determined in microcosm incubations and the incorporation of carbon from CO

Indexed as

Autotrophic ProcessesBacteriaFerrous CompoundsGeologic SedimentsNitratesNitritesOxidation-ReductionPhylogenyFerrous CompoundsNitratesNitrites

Identifiers

PMID27496777
PMCPMC5068159
OpenAlexW2490582079

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.