Evidence map›Paper›PMID 27496535›Full record

ArticleBMC genomics2016

Quantitative analyses of the hepatic proteome of methylmercury-exposed Atlantic cod (Gadus morhua) suggest oxidative stress-mediated effects on cellular energy metabolism.

Fekadu Yadetie, Silje Bjørneklett, Hilde Kristin Garberg, Eystein Oveland, Frode Berven, Anders Goksøyr, Odd André Karlsen

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Fekadu YadetieDepartment of Biology, University of Bergen, PO Box 7803, N-5020, Bergen, Norway.
Silje BjørneklettDepartment of Biology, University of Bergen, PO Box 7803, N-5020, Bergen, Norway.
Hilde Kristin GarbergDepartment of Biomedicine, Proteomics Unit (PROBE) at the University of Bergen, Bergen, Norway.
Eystein OvelandDepartment of Biomedicine, Proteomics Unit (PROBE) at the University of Bergen, Bergen, Norway.
Frode BervenDepartment of Biomedicine, Proteomics Unit (PROBE) at the University of Bergen, Bergen, Norway.
Anders GoksøyrDepartment of Biology, University of Bergen, PO Box 7803, N-5020, Bergen, Norway.
Odd André KarlsenDepartment of Biology, University of Bergen, PO Box 7803, N-5020, Bergen, Norway. Odd.Karlsen@uib.no.
University of Bergen · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundMethylmecury (MeHg) is a widely distributed environmental pollutant with considerable risk to both human health and wildlife. To gain better insight into the underlying mechanisms of MeHg-mediated toxicity, we have used label-free quantitative mass spectrometry to analyze the liver proteome of Atlantic cod (Gadus morhua) exposed in vivo to MeHg (0, 0.5, 2 mg/kg body weight) for 2 weeks.

resultsOut of a toltal of 1143 proteins quantified, 125 proteins were differentially regulated between MeHg-treated samples and controls. Using various bioinformatics tools, we performed gene ontology, pathway and network enrichment analysis, which indicated that proteins and pathways mainly related to energy metabolism, antioxidant defense, cytoskeleton remodeling, and protein synthesis were regulated in the hepatic proteome after MeHg exposure. Comparison with previous gene expression data strengthened these results, and further supported that MeHg predominantly affects many energy metabolism pathways, presumably through its strong induction of oxidative stress. Some enzymes known to have functionally important oxidation-sensitive cysteine residues in other animals are among the differentially regulated proteins, suggesting their modulations by MeHg-induced oxidative stress. Integrated analysis of the proteomics dataset combined with previous gene expression dataset showed a more pronounced effect of MeHg on amino acid, glucose and fatty acid metabolic pathways, and suggested possible interactions of the cellular energy metabolism and antioxidant defense pathways.

conclusionsMeHg disrupts mainly redox homeostasis and energy generating metabolic pathways in cod liver. The energy pathways appear to be modulated through MeHg-induced oxidative stress, possibly mediated by oxidation sensitive enzymes.

Indexed as

ProteomeProteomicsAnimalsBiomarkersComputational BiologyEnergy MetabolismGadus morhuaGene Expression ProfilingGene OntologyLiverMethylmercury CompoundsOxidative StressProtein Interaction MappingProtein Interaction MapsBiomarkersMethylmercury CompoundsProteome

Identifiers

PMID27496535
PMCPMC4974784
OpenAlexW2498025772

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.