Evidence map›Paper›PMID 27495977›Full record

ArticleBMC genomics2016

Target-site and non-target-site based resistance to the herbicide tribenuron-methyl in flixweed (Descurainia sophia L.).

Qian Yang, Wei Deng, Xuefeng Li, Qin Yu, Lianyang Bai, Mingqi Zheng

Open access · goldAbstract read
In one paragraph

Article in BMC genomics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
19.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 90 citations in OpenAlex.

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  7. The Metabolism of a Novel Cytochrome P450 (International journal of molecular sciences · 2022
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  10. Asp-376-Glu substitution endows target-site resistance to AHAS inhibitors inPhysiology and molecular biology of plants : an international journal of functional plant biology · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Qian YangDepartment of Applied Chemistry, College of Science, China Agricultural University, Beijing, 100193, China.
Wei DengDepartment of Applied Chemistry, College of Science, China Agricultural University, Beijing, 100193, China.
Xuefeng LiDepartment of Applied Chemistry, College of Science, China Agricultural University, Beijing, 100193, China.
Qin YuAustralian Herbicide Resistance Initiative, School of Plant Biology, University of Western Australia, Crawley, WA, 6009, Australia.
Lianyang BaiHunan Academy of Agricultural Science, Changsha, 410125, China.
Mingqi ZhengDepartment of Applied Chemistry, College of Science, China Agricultural University, Beijing, 100193, China. mqzheng@cau.edu.cn.
China Agricultural University · CNHunan Academy of Agricultural Sciences · CNUniversity of Western Australia · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundFlixweed (Descurainia sophia L.) is a troublesome and widespread broadleaf weed in winter fields in China, and has evolved high level resistance to acetolactate synthase (ALS)-inhibiting sulfonylurea herbicide tribenuron-methyl.

resultsWe identified a resistant flixweed population (N11) exhibiting 116.3-fold resistance to tribenuron-methyl relative to the susceptible population (SD8). Target-site ALS gene mutation Pro-197-Thr was identified in resistant plants. Moreover, the resistance can be reversed to 28.7-fold by the cytochrome P450 inhibitor malathion. The RNA-Sequencing was employed to identify candidate genes involved in non-target-site metabolic resistance in this population. Total 26 differentially expressed contigs were identified and eight of them (four P450s, one ABC transporter, three glycosyltransferase) verified by qRT-PCR. Consistent over-expression of the two contigs homology to CYP96A13 and ABCC1 transporter, respectively, were further qRT-PCR validated using additional plants from the resistant and susceptible populations.

conclusionsTribenuron-methyl resistance in flixweed is controlled by target-site ALS mutation and non-target-site based mechanisms. Two genes, CYP96A13 and ABCC1 transporter, could play an important role in metabolic resistance to tribenuron-methyl in the resistant flixweed population and justify further functional studies.

Indexed as

Acetolactate SynthaseAdaptation, BiologicalArylsulfonatesBrassicaceaeCholinesterase InhibitorsComputational BiologyDose-Response Relationship, DrugEnzyme ActivationEvolution, MolecularGene Expression ProfilingGene Expression Regulation, PlantHerbicide ResistanceHerbicidesMalathionMolecular Sequence AnnotationReproducibility of ResultsAcetolactate SynthaseArylsulfonatesCholinesterase InhibitorsHerbicidesMalathionmetsulfuron methylAcetolactate synthaseCytochrome P450FlixweedMetabolic resistanceNon-target-site based resistanceRNA-SeqTarget-site based resistanceTribenuron-methyl

Identifiers

PMID27495977
PMCPMC4974779
OpenAlexW2479563511

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.