Evidence map›Paper›PMID 27494879›Full record

ArticleOncotarget2016

Epigenetic activation of LY6K predicts the presence of metastasis and poor prognosis in breast carcinoma.

Hyun Kyung Kong, Sae Jeong Park, Ye Sol Kim, Kyoung Min Kim, Hyun-Woo Lee, Hyeok-Gu Kang, Yu Mi Woo, Eun Young Park, Je Yeong Ko, Hiromu Suzuki and 4 more

Open access · diamondAbstract read
In one paragraph

Article in Oncotarget, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Transgenic overexpression of humanOncology letters · 2019
    Article
  9. Review
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 5 institutions in 3 countries.

Hyun Kyung KongDepartment of Biological Science, Sookmyung Women's University, Seoul, Republic of Korea.
Sae Jeong ParkDepartment of Biological Science, Sookmyung Women's University, Seoul, Republic of Korea.
Ye Sol KimDepartment of Biological Science, Sookmyung Women's University, Seoul, Republic of Korea.
Kyoung Min KimDepartment of Pathology, Chonbuk National University Medical School, Research Institute of Clinical Medicine and Research Institute for Endocrine Sciences, Jeonju, Republic of Korea.
Hyun-Woo LeeDepartment of Biochemistry and Molecular Biology, Yonsei University College of Medicine, Seoul, Republic of Korea.
Hyeok-Gu KangDepartment of Biochemistry and Molecular Biology, Yonsei University College of Medicine, Seoul, Republic of Korea.
Yu Mi WooDepartment of Biological Science, Sookmyung Women's University, Seoul, Republic of Korea.
Eun Young ParkDepartment of Biological Science, Sookmyung Women's University, Seoul, Republic of Korea.
Je Yeong KoDepartment of Biological Science, Sookmyung Women's University, Seoul, Republic of Korea.
Hiromu SuzukiDepartment of Molecular Biology, Sapporo Medical University, Sapporo, Japan.
Kyung-Hee ChunDepartment of Biochemistry and Molecular Biology, Yonsei University College of Medicine, Seoul, Republic of Korea.
Erwei SongDepartment of Breast Surgery, Sun Yat-Sen Memorial Hospital, Sun-Yat-Sen University, Guangzhou, Peoples Republic of China.
Kyu Yun JangDepartment of Pathology, Chonbuk National University Medical School, Research Institute of Clinical Medicine and Research Institute for Endocrine Sciences, Jeonju, Republic of Korea.
Jong Hoon ParkDepartment of Biological Science, Sookmyung Women's University, Seoul, Republic of Korea.
Sookmyung Women's University · KRYonsei University · KRJeonbuk National University · KRSapporo Medical University · JPSun Yat-sen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of lymphocyte antigen 6 complex, locus K (LY6K) in breast cancer has been studied, whereas the epigenetic control of LY6K transcription is not fully understood. Here, we report that breast cancer patients with increased LY6K expression had shorter disease-free and overall survival than the patients with low levels of LY6K by multivariate analysis. LY6K also was upregulated in breast cancer patients with distant metastases than those without distant metastases, downregulating E-cadherin expression. Furthermore, xenograft tumor volumes from LY6K knockdown nude mice were reduced than those of mice treated with control lentivirus. Interestingly, LY6K has a CpG island (CGI) around the transcription start site and non-CGI in its promoter, called a CGI shore. LY6K expression was inversely correlated with methylation in not only CGI but CGI shore, which are associated with histone modifications. Additionally, LY6K methylation was increased by the PAX3 transcription factor due to the SNP242 mutation in LY6K CGI shore. Taken together, breast cancer risk and metastasis were significantly associated with not only LY6K expression, but also methylation of CGI shore which induced by SNP242 mutation. Our results suggest that an understanding epigenetic mechanism of the LY6K gene may be useful to diagnose carcinogenic risk and predict outcomes of patients with metastatic breast cancer.

Indexed as

DNA MethylationAnimalsAntigens, CDAntigens, LyBreast NeoplasmsCadherinsCell Line, TumorCpG IslandsEpithelial-Mesenchymal TransitionFemaleGPI-Linked ProteinsHumansMiceNeoplasm MetastasisPrognosisPromoter Regions, GeneticAntigens, CDAntigens, LyCadherinsCDH1 protein, humanGPI-Linked ProteinsLY6K protein, humanbreast cancerDNA methylationhistone modificationLY6Kmetastasis

Identifiers

PMID27494879
PMCPMC5342445
OpenAlexW2498641662

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.