Evidence map›Paper›PMID 27494702›Full record

ArticlePLoS pathogens2016

The Arabidopsis Protein Phosphatase PP2C38 Negatively Regulates the Central Immune Kinase BIK1.

Daniel Couto, Roda Niebergall, Xiangxiu Liang, Christoph A Bücherl, Jan Sklenar, Alberto P Macho, Vardis Ntoukakis, Paul Derbyshire, Denise Altenbach, Dan Maclean and 5 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
38.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 162 citations in OpenAlex.

  1. Mechanisms and balanced regulation of plant immunity.Nature reviews. Molecular cell biology · 2026
    Review
  2. Review
  3. Article
  4. Article
  5. Dimerization-activated PP2C-D2 and D5 phosphatases negatively regulate brassinosteroid signaling by antagonizing BRI1.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Receptor kinase pathway signal tuning through a nontranscriptional incoherent feedforward loop.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Article
  11. The Multifaceted Ubiquitination of BIK1 During Plant Immunity inInternational journal of molecular sciences · 2024
    Review
  12. Article
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Horticulture research · 2023
    Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 3 countries.

Daniel CoutoThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.
Roda NiebergallThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.
Xiangxiu LiangInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Christoph A BücherlThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.
Jan SklenarThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.
Alberto P MachoThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.
Vardis NtoukakisThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.
Paul DerbyshireThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.
Denise AltenbachMax-Planck-Institute for Plant Breeding Research, Cologne, Germany.
Dan MacleanThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0003-1032-0887
Silke RobatzekMax-Planck-Institute for Plant Breeding Research, Cologne, Germany.
Joachim UhrigBotanical Institute III, University of Cologne, Cologne, Germany.
Frank MenkeThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.
Jian-Min ZhouInstitute of Genetics and Developmental Biology, Chinese Academy of Sciences, Beijing, China.
Cyril ZipfelThe Sainsbury Laboratory, Norwich Research Park, Norwich, United Kingdom.ORCID 0000-0003-4935-8583
Norwich Research Park · GBChinese Academy of Sciences · CNMax Planck Institute for Plant Breeding Research · DEUniversity of Cologne · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Plants recognize pathogen-associated molecular patterns (PAMPs) via cell surface-localized pattern recognition receptors (PRRs), leading to PRR-triggered immunity (PTI). The Arabidopsis cytoplasmic kinase BIK1 is a downstream substrate of several PRR complexes. How plant PTI is negatively regulated is not fully understood. Here, we identify the protein phosphatase PP2C38 as a negative regulator of BIK1 activity and BIK1-mediated immunity. PP2C38 dynamically associates with BIK1, as well as with the PRRs FLS2 and EFR, but not with the co-receptor BAK1. PP2C38 regulates PAMP-induced BIK1 phosphorylation and impairs the phosphorylation of the NADPH oxidase RBOHD by BIK1, leading to reduced oxidative burst and stomatal immunity. Upon PAMP perception, PP2C38 is phosphorylated on serine 77 and dissociates from the FLS2/EFR-BIK1 complexes, enabling full BIK1 activation. Together with our recent work on the control of BIK1 turnover, this study reveals another important regulatory mechanism of this central immune component.

Indexed as

ArabidopsisArabidopsis ProteinsNADPH OxidasesPhosphoprotein PhosphatasesPhosphorylationPlant ImmunityProtein KinasesProtein Serine-Threonine KinasesArabidopsis ProteinsAT5G47910 protein, ArabidopsisBAK1 protein, ArabidopsisBIK1 protein, ArabidopsisFLS2 protein, ArabidopsisNADPH OxidasesPhosphoprotein PhosphatasesProtein KinasesProtein Serine-Threonine Kinases

Identifiers

PMID27494702
PMCPMC4975489
OpenAlexW2476921980

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.