Evidence map›Paper›PMID 27493652›Full record

ArticleFrontiers in plant science2016

Multiple Evolutionary Events Involved in Maintaining Homologs of Resistance to Powdery Mildew 8 in Brassica napus.

Qin Li, Jing Li, Jin-Long Sun, Xian-Feng Ma, Ting-Ting Wang, Robert Berkey, Hui Yang, Ying-Ze Niu, Jing Fan, Yan Li and 2 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Ectopic Expression ofInternational journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Qin LiRice Research Institute and Key Laboratory for Major Crop Diseases, Sichuan Agricultural University at Wenjiang Chengdu, China.
Jing LiRice Research Institute and Key Laboratory for Major Crop Diseases, Sichuan Agricultural University at Wenjiang Chengdu, China.
Jin-Long SunRice Research Institute and Key Laboratory for Major Crop Diseases, Sichuan Agricultural University at Wenjiang Chengdu, China.
Xian-Feng MaRice Research Institute and Key Laboratory for Major Crop Diseases, Sichuan Agricultural University at WenjiangChengdu, China; Institute for Bioscience and Biotechnology Research and Department of Plant Science and Landscape Architecture, University of Maryland, College Park, College ParkMD, USA.
Ting-Ting WangRice Research Institute and Key Laboratory for Major Crop Diseases, Sichuan Agricultural University at Wenjiang Chengdu, China.
Robert BerkeyInstitute for Bioscience and Biotechnology Research and Department of Plant Science and Landscape Architecture, University of Maryland, College Park, College Park MD, USA.
Hui YangRice Research Institute and Key Laboratory for Major Crop Diseases, Sichuan Agricultural University at WenjiangChengdu, China; College of Agronomy, Sichuan Agricultural University at WenjiangChengdu, China.
Ying-Ze NiuCollege of Agronomy, Sichuan Agricultural University at Wenjiang Chengdu, China.
Jing FanRice Research Institute and Key Laboratory for Major Crop Diseases, Sichuan Agricultural University at Wenjiang Chengdu, China.
Yan LiRice Research Institute and Key Laboratory for Major Crop Diseases, Sichuan Agricultural University at Wenjiang Chengdu, China.
Shunyuan XiaoInstitute for Bioscience and Biotechnology Research and Department of Plant Science and Landscape Architecture, University of Maryland, College Park, College Park MD, USA.
Wen-Ming WangRice Research Institute and Key Laboratory for Major Crop Diseases, Sichuan Agricultural University at Wenjiang Chengdu, China.
Rice Research Institute · CNSichuan Agricultural University · CNUniversity of Maryland, College Park · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Resistance to Powdery Mildew 8 (RPW8) locus confers broad-spectrum resistance to powdery mildew in Arabidopsis thaliana. There are four Homologous to RPW8s (BrHRs) in Brassica rapa and three in Brassica oleracea (BoHRs). Brassica napus (Bn) is derived from diploidization of a hybrid between B. rapa and B. oleracea, thus should have seven homologs of RPW8 (BnHRs). It is unclear whether these genes are still maintained or lost in B. napus after diploidization and how they might have been evolved. Here, we reported the identification and sequence polymorphisms of BnHRs from a set of B. napus accessions. Our data indicated that while the BoHR copy from B. oleracea is highly conserved, the BrHR copy from B. rapa is relatively variable in the B. napus genome owing to multiple evolutionary events, such as gene loss, point mutation, insertion, deletion, and intragenic recombination. Given the overall high sequence homology of BnHR genes, it is not surprising that both intragenic recombination between two orthologs and two paralogs were detected in B. napus, which may explain the loss of BoHR genes in some B. napus accessions. When ectopically expressed in Arabidopsis, a C-terminally truncated version of BnHRa and BnHRb, as well as the full length BnHRd fused with YFP at their C-termini could trigger cell death in the absence of pathogens and enhanced resistance to powdery mildew disease. Moreover, subcellular localization analysis showed that both BnHRa-YFP and BnHRb-YFP were mainly localized to the extra-haustorial membrane encasing the haustorium of powdery mildew. Taken together, our data suggest that the duplicated BnHR genes might have been subjected to differential selection and at least some may play a role in defense and could serve as resistance resource in engineering disease-resistant plants.

Indexed as

Brassica oleraceaBrassica rapaorthologparalogpolymorphismpowdery mildewRPW8

Identifiers

PMID27493652
PMCPMC4955382
OpenAlexW2488347609

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.