Evidence map›Paper›PMID 27492196›Full record

ArticleBioorganic & medicinal chemistry2016

The development of peptide ligands that target helix 69 rRNA of bacterial ribosomes.

Danielle N Dremann, Christine S Chow

Open access · greenAbstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.5field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 7 citations in OpenAlex.

  1. Peptides Targeting RNA mChemMedChem · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Danielle N DremannDepartment of Chemistry, Wayne State University, Detroit, MI 48202, USA.
Christine S ChowDepartment of Chemistry, Wayne State University, Detroit, MI 48202, USA. Electronic address: cchow@wayne.edu.
Wayne State University · US

Funding

The Role of Ribosomal RNA ModificationsR01GM087596 · NIGMS · WAYNE STATE UNIVERSITY · PI CHOW, CHRISTINE S · 2009 to 2012
$1.1M
NIGMS NIH HHS R01 GM087596
6 · The paper itself

Abstract

Antibiotic resistance prevents successful treatment of common bacterial infections, making it clear that new target locations and drugs are required to resolve this ongoing challenge. The bacterial ribosome is a common target for antibacterials due to its essential contribution to cell viability. The focus of this work is a region of the ribosome called helix 69 (H69), which was recently identified as a secondary target site for aminoglycoside antibiotics. H69 has key roles in essential ribosomal processes such as subunit association, ribosome recycling, and tRNA selection. Conserved across phylogeny, bacterial H69 also contains two pseudouridines and one 3-methylpseudouridine. Phage display revealed a heptameric peptide sequence that targeted H69. Using solid-phase synthesis, peptide variants with higher affinity and improved selectivity to modified H69 were generated. Electrospray ionization mass spectrometry was used to determine relative apparent dissociation constants of the RNA-peptide complexes.

Indexed as

Base SequenceLigandsNucleic Acid ConformationPeptidesRibosomesRNA, Ribosomal, 16SSolid-Phase Synthesis TechniquesLigandsPeptidesRNA, Ribosomal, 16SHelix 69Ligand bindingPeptidePseudouridineRibosomal RNA

Identifiers

PMID27492196
PMCPMC4992606
OpenAlexW2503302827

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.