Evidence map›Paper›PMID 27492186›Full record

ArticleBMC microbiology2016

Corynebacterium glutamicum possesses β-N-acetylglucosaminidase.

Christian Matano, Stephan Kolkenbrock, Stefanie N Hamer, Elvira Sgobba, Bruno M Moerschbacher, Volker F Wendisch

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.9field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
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  4. Recent Progress on Chemical Production From Non-food Renewable Feedstocks UsingFrontiers in bioengineering and biotechnology · 2020
    Review
  5. Fermentative Production of l-2-Hydroxyglutarate by EngineeredFrontiers in bioengineering and biotechnology · 2020
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Christian MatanoGenetics of Prokaryotes, Faculty of Biology & CeBiTec, Bielefeld University, 33501, Bielefeld, Germany.
Stephan KolkenbrockInstitute for Biology and Biotechnology of Plants, WWU Münster University, 48143, Münster, Germany.
Stefanie N HamerInstitute for Biology and Biotechnology of Plants, WWU Münster University, 48143, Münster, Germany.
Elvira SgobbaGenetics of Prokaryotes, Faculty of Biology & CeBiTec, Bielefeld University, 33501, Bielefeld, Germany.
Bruno M MoerschbacherInstitute for Biology and Biotechnology of Plants, WWU Münster University, 48143, Münster, Germany.
Volker F WendischGenetics of Prokaryotes, Faculty of Biology & CeBiTec, Bielefeld University, 33501, Bielefeld, Germany. volker.wendisch@uni-bielefeld.de.
Bielefeld University · DEUniversity of Münster · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIn Gram-positive Corynebacterium glutamicum and other members of the suborder Corynebacterianeae, which includes mycobacteria, cell elongation and peptidoglycan biosynthesis is mainly due to polar growth. C. glutamicum lacks an uptake system for the peptidoglycan constituent N-acetylglucosamine (GlcNAc), but is able to catabolize GlcNAc-6-phosphate. Due to its importance in white biotechnology and in order to ensure more sustainable processes based on non-food renewables and to reduce feedstock costs, C. glutamicum strains have previously been engineered to produce amino acids from GlcNAc. GlcNAc also is a constituent of chitin, but it is unknown if C. glutamicum possesses chitinolytic enzymes.

resultsChitin was shown here not to be growth substrate for C. glutamicum. However, its genome encodes a putative N-acetylglucosaminidase. The nagA 2 gene product was active as β-N-acetylglucosaminidase with 0.27 mM 4-nitrophenyl N,N'-diacetyl-β-D-chitobioside as substrate supporting half-maximal activity. NagA2 was secreted into the culture medium when overproduced with TAT and Sec dependent signal peptides, while it remained cytoplasmic when overproduced without signal peptide. Heterologous expression of exochitinase gene chiB from Serratia marcescens resulted in chitinolytic activity and ChiB secretion was enhanced when a signal peptide from C. glutamicum was used. Colloidal chitin did not support growth of a strain secreting exochitinase ChiB and β-N-acetylglucosaminidase NagA2.

conclusionsC. glutamicum possesses β-N-acetylglucosaminidase. In the wild type, β-N-acetylglucosaminidase activity was too low to be detected. However, overproduction of the enzyme fused to TAT or Sec signal peptides led to secretion of active β-N-acetylglucosaminidase. The finding that concomitant secretion of endogenous NagA2 and exochitinase ChiB from S. marcescens did not entail growth with colloidal chitin as sole or combined carbon source, may indicate the requirement for higher or additional enzyme activities such as processive chitinase or endochitinase activities.

Indexed as

AcetylglucosamineAcetylglucosaminidaseBacterial ProteinsBase SequenceChitinChitinasesCorynebacterium glutamicumCytoplasmEnzyme ActivationEscherichia coliPeptidoglycanSequence AlignmentSubstrate SpecificityAcetylglucosamineAcetylglucosaminidaseBacterial ProteinsChiB protein, Serratia marcescensChitinChitinasesPeptidoglycanChitinaseCorynebacterium glutamicumN-acetylglucosaminidaseNagA2Secretion

Identifiers

PMID27492186
PMCPMC4974736
OpenAlexW2489828939

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.