Evidence map›Paper›PMID 27492067›Full record

ArticleInternational journal of computer assisted radiology and surgery2016

Automated visibility map of the internal colon surface from colonoscopy video.

Mohammad Ali Armin, Girija Chetty, Hans De Visser, Cedric Dumas, Florian Grimpen, Olivier Salvado

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In one paragraph

Article in International journal of computer assisted radiology and surgery, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Mohammad Ali ArminHCT, University of Canberra, Bruce, Canberra, ACT, Australia. m.a.armin@gmail.com.ORCID http://orcid.org/0000-0003-4884-1557
Girija ChettyHCT, University of Canberra, Bruce, Canberra, ACT, Australia.
Hans De VisserCSIRO Biomedical Informatics, The Australian e-Health Research Centre, Level 5, UQ Health Sciences, Brisbane, QLD, 4029, Australia.
Cedric DumasCSIRO Biomedical Informatics, The Australian e-Health Research Centre, Level 5, UQ Health Sciences, Brisbane, QLD, 4029, Australia.
Florian GrimpenDepartment of Gastroenterology and Hepatology, Royal Brisbane and Women's Hospital, Herston, Brisbane, QLD, Australia.
Olivier SalvadoCSIRO Biomedical Informatics, The Australian e-Health Research Centre, Level 5, UQ Health Sciences, Brisbane, QLD, 4029, Australia. Olivier.Salvado@csiro.au.
Commonwealth Scientific and Industrial Research Organisation · AUUniversity of Canberra · AURoyal Brisbane and Women's Hospital · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeOptical colonoscopy is a prominent procedure by which clinicians examine the surface of the colon for cancerous polyps using a flexible colonoscope. One of the main concerns regarding the quality of the colonoscopy is to ensure that the whole colonic surface has been inspected for abnormalities. In this paper, we aim at estimating areas that have not been covered thoroughly by providing a map from the internal colon surface.

methodsCamera parameters were estimated using optical flow between consecutive colonoscopy frames. A cylinder model was fitted to the colon structure using 3D pseudo stereo vision and projected into each frame. A circumferential band from the cylinder was extracted to unroll the internal colon surface (band image). By registering these band images, drift in estimating camera motion could be reduced, and a visibility map of the colon surface could be generated, revealing uncovered areas by the colonoscope. Hidden areas behind haustral folds were ignored in this study. The method was validated on simulated and actual colonoscopy videos. The realistic simulated videos were generated using a colonoscopy simulator with known ground truth, and the actual colonoscopy videos were manually assessed by a clinical expert.

resultsThe proposed method obtained a sensitivity and precision of 98 and 96 % for detecting the number of uncovered areas on simulated data, whereas validation on real videos showed a sensitivity and precision of 96 and 78 %, respectively. Error in camera motion drift could be reduced by almost 50 % using results from band image registration.

conclusionUsing a simple cylindrical model for the colon and reducing drift by registering band images allows for the generation of visibility maps. The current results also suggest that the provided feedback through the visibility map could enhance clinicians' awareness of uncovered areas, which in return could reduce the probability of missing polyps.

Indexed as

Imaging, Three-DimensionalVideo RecordingColonColonic PolypsColonoscopesColonoscopyEquipment DesignHumansCamera motion driftCamera motion parametersColonoscopy qualityOptical colonoscopyUncovered areaVisibility map

Identifiers

PMID27492067
OpenAlexW2492850588

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.