Evidence map›Paper›PMID 27491940›Full record

ArticleMolecular biology reports2016

Identification and transcript profiles of citrus growth-regulating factor genes involved in the regulation of leaf and fruit development.

Xiao Liu, Ling-Xia Guo, Long-Fei Jin, Yong-Zhong Liu, Tao Liu, Yu-Hua Fan, Shu-Ang Peng

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Article in Molecular biology reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 1 pooled it
6.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 1 synthesis or guideline pooled it, 38 citations in OpenAlex.

  1. Pooled it
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  5. Genome-Wide Analysis of Flax (International journal of molecular sciences · 2023
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  6. Genome-Wide Identification and Characterization of the GRF Gene Family inInternational journal of molecular sciences · 2023
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  7. Comprehensive Analysis for GRF Transcription Factors in Sacred Lotus (International journal of molecular sciences · 2022
    Review
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors at 1 institution in 2 countries.

Xiao LiuKey Laboratory of Horticultural Plant Biology (Huazhong Agricultural University), Ministry of Education, Wuhan, 430070, People's Republic of China.
Ling-Xia GuoKey Laboratory of Horticultural Plant Biology (Huazhong Agricultural University), Ministry of Education, Wuhan, 430070, People's Republic of China.
Long-Fei JinKey Laboratory of Horticultural Plant Biology (Huazhong Agricultural University), Ministry of Education, Wuhan, 430070, People's Republic of China.
Yong-Zhong LiuKey Laboratory of Horticultural Plant Biology (Huazhong Agricultural University), Ministry of Education, Wuhan, 430070, People's Republic of China. liuyongzhong@mail.hzau.edu.cn.ORCID http://orcid.org/0000-0002-1071-490X
Tao LiuKey Laboratory of Horticultural Plant Biology (Huazhong Agricultural University), Ministry of Education, Wuhan, 430070, People's Republic of China.
Yu-Hua FanKey Laboratory of Horticultural Plant Biology (Huazhong Agricultural University), Ministry of Education, Wuhan, 430070, People's Republic of China.
Shu-Ang PengKey Laboratory of Horticultural Plant Biology (Huazhong Agricultural University), Ministry of Education, Wuhan, 430070, People's Republic of China.
Huazhong Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Growth-regulating factor (GRF) is an important protein in GA-mediated response, with key roles in plant growth and development. However, it is not known whether or how the GRF proteins in citrus to regulate organ size. In this study, nine citrus GRF genes (CsGRF1-9) were validated from the 'Anliu' sweet orange (AL, Citrus sinensis cv. Anliu) by PCR amplification. They all contain two conserved motifs (QLQ and WRC) and have 3-4 exons. The transcript levels of genes were detected by qRT-PCR. Transcript analysis showed that (1) CsGRF 1, 2, 5, 6, 7, and 9 expressed predominantly in young leaf, CsGRF 3 and 4 expressed predominantly in fruit immature juice sacs and CsGRF 8 expressed predominantly in root; (2) all citrus GRF genes had significantly higher expression in young leaves than mature leaf; (3) in juice sacs, the transcript levels of CsGRF1, 4, 5, 6, and 8 increased significantly while the transcript levels of CsGRF2, 3, 7, and 9 had no significant change from 80 DAF to 100 DAF. Besides, GA3 treatment did not affect the transcript levels of CsGRF5 and CsGRF6 but significantly increased the transcript levels of the other seven CsGRF genes in young leaves. These results suggested that all CsGRF genes involve in the leaf development, CsGRF1, 4, 5, 6, and 8 act developmentally whilst CsGRF2, 3, 7, and 9 play fundamental roles in fruit cell enlargement, which may be through GA pathway or GA-independent pathway.

Indexed as

CitrusFruitGene Expression ProfilingGene Expression Regulation, DevelopmentalGene Expression Regulation, PlantGibberellinsPhylogenyPlant LeavesPlant ProteinsTissue DistributionTranscription Factorsgibberellic acidGibberellinsPlant ProteinsTranscription FactorsCitrusFruit developmentGA3GRF

Identifiers

PMID27491940
OpenAlexW2499617788

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.