Evidence map›Paper›PMID 27490308›Full record

ArticleChemphyschem : a European journal of chemical physics and physical chemistry2016

Effects of Visible-Light Irradiation of Protoporphyrin IX on the Self-Assembly of Tubulin Heterodimers.

Alicia Vall-Sagarra, Brady McMicken, Santi Nonell, Lorenzo Brancaleon

Abstract read
In one paragraph

Article in Chemphyschem : a European journal of chemical physics and physical chemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact, top 95% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Alicia Vall-SagarraInstitut Quimic de Sarria, Universitat Ramon Llull, Via Augusta 390, 08017, Barcelona, Spain.
Brady McMickenDepartment of Physics and Astronomy, University of Texas at San Antonio, San Antonio, TX, USA.
Santi NonellInstitut Quimic de Sarria, Universitat Ramon Llull, Via Augusta 390, 08017, Barcelona, Spain.
Lorenzo BrancaleonDepartment of Physics and Astronomy, University of Texas at San Antonio, San Antonio, TX, USA. lorenzo.brancaleon@utsa.edu.ORCID http://orcid.org/0000-0003-1039-339X
Institut Químic de Sarrià · ESThe University of Texas at San Antonio · US

Funding

STRUCTURAL VISUALIZATION IN BIOINFORMATICSG12RR013646 · NCRR · UNIVERSITY OF TEXAS SAN ANTONIO · PI WENK, CAROLA · 1998 to 2011
$19.6M
NCRR NIH HHS G12 RR013646
6 · The paper itself

Abstract

The formation and the effects of laser irradiation of the complex formed by protoporphyrin IX (PPIX) and tubulin was investigated. We have used tubulin as a model protein to investigate whether docked photoactive ligands can affect the structure and function of polypeptides upon exposure to visible light. We observed that laser irradiation in the Soret band prompts bleaching of the PPIX, which is accompanied by a sharp decrease in the intensity and average fluorescence lifetime of the protein (dominated by the four tryptophan residues of the tubulin monomer). The kinetics indicate non-trivial effects and suggest that the photosensitization of the PPIX bound to tubulin prompts structural alterations of the protein. These modifications were also observed through changes in the energy transfer between Trp residues and PPIX. The results suggest that laser irradiation produces localized partial unfolding of tubulin and that the changes prompt modification of the formation of microtubules in vitro. Measurements of singlet oxygen formation were inconclusive in determining whether the changes are prompted by reactive oxygen species or other excited state mechanisms.

Indexed as

LightDimerizationFluorescenceProtoporphyrinsTubulinprotoporphyrin IXProtoporphyrinsTubulinlaser irradiationmicrotubulesprotein unfoldingprotoporphyrin IXtubulin

Identifiers

PMID27490308
PMCPMC5177992
OpenAlexW2485715242

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.