Evidence map›Paper›PMID 27488946›Full record

ArticleScientific reports2016

Phylogeographic Patterns in Africa and High Resolution Delineation of Genetic Clades in the Lion (Panthera leo).

L D Bertola, H Jongbloed, K J van der Gaag, P de Knijff, N Yamaguchi, H Hooghiemstra, H Bauer, P Henschel, P A White, C A Driscoll and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
6.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 90 citations in OpenAlex.

  1. Article
  2. Pan-African model explainsbioRxiv : the preprint server for biology · 2026
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  4. First Mitogenome of the Critically Endangered Arabian Leopard (Animals : an open access journal from MDPI · 2025
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  7. Article
  8. Article
  9. From Caves to the Savannah, the Mitogenome History of Modern Lions (International journal of molecular sciences · 2024
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Paleo-ENSO influence on African environments and early modern humans.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 6 countries.

L D BertolaLeiden University, Institute of Environmental Sciences (CML), PO Box 9518, 2300 RA Leiden, The Netherlands.
H JongbloedLeiden University, Institute of Environmental Sciences (CML), PO Box 9518, 2300 RA Leiden, The Netherlands.
K J van der GaagForensic Laboratory for DNA Research, Department of Human Genetics, Leiden University Medical Centre, P.O. Box 9600, 2300 RC Leiden, The Netherlands.
P de KnijffForensic Laboratory for DNA Research, Department of Human Genetics, Leiden University Medical Centre, P.O. Box 9600, 2300 RC Leiden, The Netherlands.
N YamaguchiQatar University, Department of Biological and Environmental Sciences, College of Arts and Sciences, PO Box 2713, Doha, Qatar.
H HooghiemstraInstitute for Biodiversity and Ecosystem Dynamics, University of Amsterdam, Science Park 904, 1018 XH Amsterdam, The Netherlands.
H BauerWildCRU, Recanati-Kaplan Centre, University of Oxford. Tubney House, Abingdon Road, OX13 5QL, UK.
P HenschelPanthera, 8 West 40th Street, 18th Floor, New York, NY 10018, USA.
P A WhiteCenter for Tropical Research, Institute of the Environment and Sustainability, University of California, Los Angeles, CA 90095-1496, USA.
C A DriscollWildlife Institute of India, Dehradun 248001, Uttarakhand, India.
T TendeA. P. Leventis Ornithological Research Institute, P.O. Box 13404 Jos, Nigeria.
U OttossonA. P. Leventis Ornithological Research Institute, P.O. Box 13404 Jos, Nigeria.
Y SaiduNigeria National Park Service, PMB 0258 Garki-Abuja, Nigeria.
K VrielingLeiden University, Institute of Biology Leiden (IBL), PO Box 9505, 2300 RA Leiden, The Netherlands.
H H de IonghLeiden University, Institute of Environmental Sciences (CML), PO Box 9518, 2300 RA Leiden, The Netherlands.
Leiden University · NLPanthera Corporation · USQatar University · QAUniversity of Amsterdam · NLUniversity of California, Los Angeles · USUniversity of Oxford · GBWildlife Institute of India · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Comparative phylogeography of African savannah mammals shows a congruent pattern in which populations in West/Central Africa are distinct from populations in East/Southern Africa. However, for the lion, all African populations are currently classified as a single subspecies (Panthera leo leo), while the only remaining population in Asia is considered to be distinct (Panthera leo persica). This distinction is disputed both by morphological and genetic data. In this study we introduce the lion as a model for African phylogeography. Analyses of mtDNA sequences reveal six supported clades and a strongly supported ancestral dichotomy with northern populations (West Africa, Central Africa, North Africa/Asia) on one branch, and southern populations (North East Africa, East/Southern Africa and South West Africa) on the other. We review taxonomies and phylogenies of other large savannah mammals, illustrating that similar clades are found in other species. The described phylogeographic pattern is considered in relation to large scale environmental changes in Africa over the past 300,000 years, attributable to climate. Refugial areas, predicted by climate envelope models, further confirm the observed pattern. We support the revision of current lion taxonomy, as recognition of a northern and a southern subspecies is more parsimonious with the evolutionary history of the lion.

Indexed as

AfricaAnimalsBase SequenceBiological EvolutionDNA, MitochondrialEnvironmentEvolution, MolecularGenetic VariationLionsPhylogeographySequence Analysis, DNADNA, Mitochondrial

Identifiers

PMID27488946
PMCPMC4973251
OpenAlexW2482936985

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.