Evidence map›Paper›PMID 27488652›Full record

ArticleProceedings. Biological sciences2016

Seeing red to being red: conserved genetic mechanism for red cone oil droplets and co-option for red coloration in birds and turtles.

Hanlu Twyman, Nicole Valenzuela, Robert Literman, Staffan Andersson, Nicholas I Mundy

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings. Biological sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
22.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 88 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Hanlu TwymanDepartment of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK.
Nicole ValenzuelaDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, 251 Bessey Hall, Ames, IA 50011, USA.
Robert LitermanDepartment of Ecology, Evolution, and Organismal Biology, Iowa State University, 251 Bessey Hall, Ames, IA 50011, USA.
Staffan AnderssonDepartment of Biological and Environmental Sciences, University of Gothenburg, Göteborg 40530, Sweden.
Nicholas I MundyDepartment of Zoology, University of Cambridge, Cambridge CB2 3EJ, UK nim21@cam.ac.uk.ORCID 0000-0002-5545-1517
Iowa State University · USUniversity of Cambridge · GBUniversity of Gothenburg · SE

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

Avian ketocarotenoid pigments occur in both the red retinal oil droplets that contribute to colour vision and bright red coloration used in signalling. Turtles are the only other tetrapods with red retinal oil droplets, and some also display red carotenoid-based coloration. Recently, the CYP2J19 gene was strongly implicated in ketocarotenoid synthesis in birds. Here, we investigate CYP2J19 evolution in relation to colour vision and red coloration in reptiles using genomic and expression data. We show that turtles, but not crocodiles or lepidosaurs, possess a CYP2J19 orthologue, which arose via gene duplication before turtles and archosaurs split, and which is strongly and specifically expressed in the ketocarotenoid-containing retina and red integument. We infer that CYP2J19 initially functioned in colour vision in archelosaurs and conclude that red ketocarotenoid-based coloration evolved independently in birds and turtles via gene regulatory changes of CYP2J19 Our results suggest that red oil droplets contributed to colour vision in dinosaurs and pterosaurs.

Indexed as

Biological EvolutionAnimalsBirdsColor VisionCytochrome P-450 CYP2J2Cytochrome P-450 Enzyme SystemPigmentationRetinaRetinal Cone Photoreceptor CellsTurtlesCytochrome P-450 CYP2J2Cytochrome P-450 Enzyme Systembirdscarotenoid colorationcolour visionCYP2Jretinal oil dropletsturtles

Identifiers

PMID27488652
PMCPMC5013772
OpenAlexW2489497420

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.