Evidence map›Paper›PMID 27488374›Full record

ArticleOpen biology2016

Nodal signalling in Xenopus: the role of Xnr5 in left/right asymmetry and heart development.

Emmanuel Tadjuidje, Matthew Kofron, Adnan Mir, Christopher Wylie, Janet Heasman, Sang-Wook Cha

Open access · goldAbstract read
In one paragraph

Article in Open biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. TGF-β Family Signaling in Early Vertebrate Development.Cold Spring Harbor perspectives in biology · 2018
    Review
  3. Multiple Roles of Pitx2 in Cardiac Development and Disease.Journal of cardiovascular development and disease · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Emmanuel TadjuidjeDepartment of Biological Sciences, Alabama State University, 1627 Hall Street, Montgomery, AL 36101, USA etadjuidje@alasu.edu.
Matthew KofronCincinnati Children's Research Foundation, 3333 Burnet Avenue, Cincinnati, OH 45229, USA.
Adnan MirCincinnati Children's Research Foundation, 3333 Burnet Avenue, Cincinnati, OH 45229, USA.
Christopher WylieCincinnati Children's Research Foundation, 3333 Burnet Avenue, Cincinnati, OH 45229, USA.
Janet HeasmanCincinnati Children's Research Foundation, 3333 Burnet Avenue, Cincinnati, OH 45229, USA.
Sang-Wook ChaCincinnati Children's Research Foundation, 3333 Burnet Avenue, Cincinnati, OH 45229, USA sang-wook.cha@cchmc.org.
Cincinnati Children's Hospital Medical Center · USAlabama State University · US

Funding

Stem Cell/Organoid and Genome Editing CoreP30DK078392 · NIDDK · CINCINNATI CHILDRENS HOSP MED CTR · PI LEE ARMISTEAD DENSON · 2007 to 2026
$24.4M
THE MOLECULAR BASIS OF AXIS FORMATION IN XENOPUSR01HD033002 · NICHD · UNIVERSITY OF MINNESOTA TWIN CITIES · PI HEASMAN, JANET · 1995 to 2005
$1.3M
Wnt/PCP Signaling in the Intestinal EpitheliumK01DK101618 · NIDDK · UNIVERSITY OF CENTRAL MISSOURI · PI CHA, SANG-WOOK · 2014 to 2018
$645k
NICHD NIH HHS R01 HD033002NIDDK NIH HHS K01 DK101618NIDDK NIH HHS P30 DK078392
6 · The paper itself

Abstract

Nodal class TGF-β signalling molecules play essential roles in establishing the vertebrate body plan. In all vertebrates, nodal family members have specific waves of expression required for tissue specification and axis formation. In Xenopus laevis, six nodal genes are expressed before gastrulation, raising the question of whether they have specific roles or act redundantly with each other. Here, we examine the role of Xnr5. We find it acts at the late blastula stage as a mesoderm inducer and repressor of ectodermal gene expression, a role it shares with Vg1. However, unlike Vg1, Xnr5 depletion reduces the expression of the nodal family member xnr1 at the gastrula stage. It is also required for left/right laterality by controlling the expression of the laterality genes xnr1, antivin (lefty) and pitx2 at the tailbud stage. In Xnr5-depleted embryos, the heart field is established normally, but symmetrical reduction in Xnr5 levels causes a severely stunted midline heart, first evidenced by a reduction in cardiac troponin mRNA levels, while left-sided reduction leads to randomization of the left/right axis. This work identifies Xnr5 as the earliest step in the signalling pathway establishing normal heart laterality in Xenopus.

Indexed as

Body PatterningAnimalsBlastulaGene Expression Regulation, DevelopmentalHeartLeft-Right Determination FactorsNodal Signaling LigandsSignal TransductionTranscription FactorsXenopus laevisXenopus ProteinsLeft-Right Determination Factorsnodal1 protein, Xenopusnodal5 protein, XenopusNodal Signaling LigandsTranscription FactorsXenopus ProteinslateralitynodalorganogenesisXnr1Xnr5

Identifiers

PMID27488374
PMCPMC5008007
OpenAlexW2492068023

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.