Evidence map›Paper›PMID 27488189›Full record

ArticleNucleic acids research2016

Impact of donor-recipient phylogenetic distance on bacterial genome transplantation.

Fabien Labroussaa, Anne Lebaudy, Vincent Baby, Géraldine Gourgues, Dominick Matteau, Sanjay Vashee, Pascal Sirand-Pugnet, Sébastien Rodrigue, Carole Lartigue

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 67 citations in OpenAlex.

  1. Article
  2. Selection-free whole genome transplantation revives dead microbes.bioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. The design and engineering of synthetic genomes.Nature reviews. Genetics · 2025
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Cloning and sequencing analysis of wholeFrontiers in microbiology · 2024
    Article
  12. Frontiers in genetics · 2024
    Review
  13. Article
  14. Article
  15. Review
  16. Cross-species microbial genome transfer: a Review.Frontiers in bioengineering and biotechnology · 2023
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Fabien LabroussaaINRA, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France University of Bordeaux, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France.
Anne LebaudyINRA, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France University of Bordeaux, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France.
Vincent BabyUniversité de Sherbrooke, Département de biologie, 2500 boulevard Université Sherbrooke (Québec), J1K 2R1, Canada.
Géraldine GourguesINRA, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France University of Bordeaux, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France.
Dominick MatteauUniversité de Sherbrooke, Département de biologie, 2500 boulevard Université Sherbrooke (Québec), J1K 2R1, Canada.
Sanjay VasheeJ. Craig Venter Institute, Rockville, MD 20850, USA.
Pascal Sirand-PugnetINRA, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France University of Bordeaux, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France.
Sébastien RodrigueUniversité de Sherbrooke, Département de biologie, 2500 boulevard Université Sherbrooke (Québec), J1K 2R1, Canada.
Carole LartigueINRA, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France University of Bordeaux, UMR 1332 de Biologie du Fruit et Pathologie, F-33140 Villenave d'Ornon, France clartigu@bordeaux.inra.fr.
Biologie du Fruit et Pathologie · FRUniversité de Sherbrooke · CAUniversité de Bordeaux · FRJ. Craig Venter Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genome transplantation (GT) allows the installation of purified chromosomes into recipient cells, causing the resulting organisms to adopt the genotype and the phenotype conferred by the donor cells. This key process remains a bottleneck in synthetic biology, especially for genome engineering strategies of intractable and economically important microbial species. So far, this process has only been reported using two closely related bacteria, Mycoplasma mycoides subsp. capri (Mmc) and Mycoplasma capricolum subsp. capricolum (Mcap), and the main factors driving the compatibility between a donor genome and a recipient cell are poorly understood. Here, we investigated the impact of the evolutionary distance between donor and recipient species on the efficiency of GT. Using Mcap as the recipient cell, we successfully transplanted the genome of six bacteria belonging to the Spiroplasma phylogenetic group but including species of two distinct genera. Our results demonstrate that GT efficiency is inversely correlated with the phylogenetic distance between donor and recipient bacteria but also suggest that other species-specific barriers to GT exist. This work constitutes an important step toward understanding the cellular factors governing the GT process in order to better define and eventually extend the existing genome compatibility limit.

Indexed as

Genome, BacterialPhylogenyTransformation, GeneticCloning, MolecularDNA, BacterialDNA ReplicationGenetic MarkersGenotypeMutagenesis, InsertionalMycoplasma capricolumMycoplasma mycoidesPhenotypePlasmidsReproducibility of ResultsSaccharomyces cerevisiaeDNA, BacterialGenetic Markers

Identifiers

PMID27488189
PMCPMC5041484
OpenAlexW2500278707

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.