Evidence map›Paper›PMID 27487725›Full record

ArticleNature communications2016

Chromatin remodelling and antisense-mediated up-regulation of the developmental switch gene eud-1 control predatory feeding plasticity.

Vahan Serobyan, Hua Xiao, Suryesh Namdeo, Christian Rödelsperger, Bogdan Sieriebriennikov, Hanh Witte, Waltraud Röseler, Ralf J Sommer

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
4.9field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 59 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Developmental transcriptomics inGenome research · 2025
    Article
  7. High Nutritional Conditions Influence Feeding Plasticity in Pristionchus pacificus and Render Worms Non-Predatory.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2025
    Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Caspofungin Affects Extracellular Vesicle Production and Cargo inJournal of fungi (Basel, Switzerland) · 2022
    Article
  16. Article
  17. Article
  18. Review
  19. Bacterial vitamin BThe ISME journal · 2020
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Vahan SerobyanDepartment for Evolutionary Biology, Max-Planck-Institute for Developmental Biology, Spemannstrasse 35, 72076 Tübingen, Germany.
Hua XiaoDepartment for Evolutionary Biology, Max-Planck-Institute for Developmental Biology, Spemannstrasse 35, 72076 Tübingen, Germany.
Suryesh NamdeoDepartment for Evolutionary Biology, Max-Planck-Institute for Developmental Biology, Spemannstrasse 35, 72076 Tübingen, Germany.
Christian RödelspergerDepartment for Evolutionary Biology, Max-Planck-Institute for Developmental Biology, Spemannstrasse 35, 72076 Tübingen, Germany.
Bogdan SieriebriennikovDepartment for Evolutionary Biology, Max-Planck-Institute for Developmental Biology, Spemannstrasse 35, 72076 Tübingen, Germany.
Hanh WitteDepartment for Evolutionary Biology, Max-Planck-Institute for Developmental Biology, Spemannstrasse 35, 72076 Tübingen, Germany.
Waltraud RöselerDepartment for Evolutionary Biology, Max-Planck-Institute for Developmental Biology, Spemannstrasse 35, 72076 Tübingen, Germany.
Ralf J SommerDepartment for Evolutionary Biology, Max-Planck-Institute for Developmental Biology, Spemannstrasse 35, 72076 Tübingen, Germany.
Max Planck Institute for Developmental Biology · DEUniversity of Missouri · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phenotypic plasticity has been suggested to act through developmental switches, but little is known about associated molecular mechanisms. In the nematode Pristionchus pacificus, the sulfatase eud-1 was identified as part of a developmental switch controlling mouth-form plasticity governing a predatory versus bacteriovorous mouth-form decision. Here we show that mutations in the conserved histone-acetyltransferase Ppa-lsy-12 and the methyl-binding-protein Ppa-mbd-2 mimic the eud-1 phenotype, resulting in the absence of one mouth-form. Mutations in both genes cause histone modification defects and reduced eud-1 expression. Surprisingly, Ppa-lsy-12 mutants also result in the down-regulation of an antisense-eud-1 RNA. eud-1 and antisense-eud-1 are co-expressed and further experiments suggest that antisense-eud-1 acts through eud-1 itself. Indeed, overexpression of the antisense-eud-1 RNA increases the eud-1-sensitive mouth-form and extends eud-1 expression. In contrast, this effect is absent in eud-1 mutants indicating that antisense-eud-1 positively regulates eud-1. Thus, chromatin remodelling and antisense-mediated up-regulation of eud-1 control feeding plasticity in Pristionchus.

Indexed as

Genes, DevelopmentalGenes, HelminthGenes, SwitchPredatory BehaviorAnimalsChromatin Assembly and DisassemblyDown-RegulationGene Expression Regulation, DevelopmentalGenetic LociGenetic PleiotropyHistone AcetyltransferasesHistonesMouthMutationNematodaProtein Processing, Post-TranslationalHistone AcetyltransferasesHistonesRNA, AntisenseRNA, Messenger

Identifiers

PMID27487725
PMCPMC4976200
OpenAlexW2494471199

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.