Evidence map›Paper›PMID 27487256›Full record

ArticleJournal of the American Chemical Society2016

Tyrosine-Coordinated P-Cluster in G. diazotrophicus Nitrogenase: Evidence for the Importance of O-Based Ligands in Conformationally Gated Electron Transfer.

Cedric P Owens, Faith E H Katz, Cole H Carter, Victoria F Oswald, F Akif Tezcan

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 45 citations in OpenAlex.

  1. Molecular basis of NNature communications · 2026
    Article
  2. Review
  3. Iron-sulfur clusters: the road to room temperature.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2025
    Review
  4. Review
  5. Facile and dynamic cleavage of every iron-sulfide bond in cuboidal iron-sulfur clusters.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Statistical analysis of PRSC advances · 2022
    Article
  10. Article
  11. Article
  12. Article
  13. Review
  14. The Spectroscopy of Nitrogenases.Chemical reviews · 2020
    Review
  15. Review
  16. Electron Transfer in Nitrogenase.Chemical reviews · 2020
    Review
  17. Article
  18. Double-Cubane [8Fe9S] Clusters: A Novel Nitrogenase-Related Cofactor in Biology.Chembiochem : a European journal of chemical biology · 2020
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Cedric P OwensDepartment of Chemistry and Biochemistry, University of California, San Diego , 9500 Gilman Drive, La Jolla, California 92093-0356, United States.
Faith E H KatzDepartment of Chemistry and Biochemistry, University of California, San Diego , 9500 Gilman Drive, La Jolla, California 92093-0356, United States.
Cole H CarterDepartment of Chemistry and Biochemistry, University of California, San Diego , 9500 Gilman Drive, La Jolla, California 92093-0356, United States.
Victoria F OswaldDepartment of Chemistry, University of California , Irvine, 1102 Natural Science II, Irvine, California 92697, United States.
F Akif TezcanDepartment of Chemistry and Biochemistry, University of California, San Diego , 9500 Gilman Drive, La Jolla, California 92093-0356, United States.
University of California, San Diego · USUniversity of California, Irvine · US

Funding

Mechanism of Energy Transduction and Substrate Activation in Biological NitrogenR01GM099813 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TEZCAN, FAIK AKIF · 2012 to 2016
$1.3M
NIGMS NIH HHS R01 GM099813
6 · The paper itself

Abstract

The P-cluster is a unique iron-sulfur center that likely functions as a dynamic electron (e(-)) relay site between the Fe-protein and the catalytic FeMo-cofactor in nitrogenase. The P-cluster has been shown to undergo large conformational changes upon 2-e(-) oxidation which entail the coordination of two of the Fe centers to a Ser side chain and a backbone amide N, respectively. Yet, how and if this 2-e(-) oxidized state (P(OX)) is involved in catalysis by nitrogenase is not well established. Here, we present the crystal structures of reduced and oxidized MoFe-protein (MoFeP) from Gluconacetobacter diazotrophicus (Gd), which natively possesses an Ala residue in the position of the Ser ligand to the P-cluster. While reduced Gd-MoFeP is structurally identical to previously characterized counterparts around the FeMo-cofactor, oxidized Gd-MoFeP features an unusual Tyr coordination to its P-cluster along with ligation by a backbone amide nitrogen. EPR analysis of the oxidized Gd-MoFeP P-cluster confirmed that it is a 2-e(-) oxidized, integer-spin species. Importantly, we have found that the sequence positions corresponding to the Ser and Tyr ligands are almost completely covariant among Group I nitrogenases. These findings strongly support the possibility that the P(OX) state is functionally relevant in nitrogenase catalysis and that a hard, O-based anionic ligand serves to stabilize this state in a switchable fashion.

Indexed as

ElectronsAlanineBacterial ProteinsBinding SitesCatalysisElectron Spin Resonance SpectroscopyElectron TransportGluconacetobacterIron-Sulfur ProteinsLigandsMolybdoferredoxinNitrogenaseOxidation-ReductionOxygenProtein ConformationTyrosineAlanineBacterial ProteinsIron-Sulfur ProteinsLigandsMolybdoferredoxinNitrogenaseOxygenTyrosine

Identifiers

PMID27487256
PMCPMC6129449
OpenAlexW2490374262

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.