Evidence map›Paper›PMID 27486751›Full record

ArticlePloS one2016

Exopolysaccharide Production by Sinorhizobium fredii HH103 Is Repressed by Genistein in a NodD1-Dependent Manner.

Sebastián Acosta-Jurado, Pilar Navarro-Gómez, Piedad Del Socorro Murdoch, Juan-Carlos Crespo-Rivas, Shi Jie, Lidia Cuesta-Berrio, José-Enrique Ruiz-Sainz, Miguel-Ángel Rodríguez-Carvajal, José-María Vinardell

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Review
  7. Review
  8. Surface Motility Regulation ofInternational journal of molecular sciences · 2022
    Article
  9. TheMicroorganisms · 2022
    Article
  10. Review
  11. OnfD, an AraC-Type Transcriptional Regulator Encoded byApplied and environmental microbiology · 2020
    Article
  12. Article
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Sebastián Acosta-JuradoDepartamento de Microbiología, Facultad de Biología, Universidad de Sevilla, Sevilla, Spain.
Pilar Navarro-GómezDepartamento de Microbiología, Facultad de Biología, Universidad de Sevilla, Sevilla, Spain.
Piedad Del Socorro MurdochDepartamento de Bioquímica Vegetal y Biología Molecular, Facultad de Biología, Universidad de Sevilla, Sevilla, Spain.
Juan-Carlos Crespo-RivasDepartamento de Microbiología, Facultad de Biología, Universidad de Sevilla, Sevilla, Spain.
Shi JieDepartamento de Microbiología, Facultad de Biología, Universidad de Sevilla, Sevilla, Spain.
Lidia Cuesta-BerrioDepartamento of Química Orgánica, Facultad de Química, Universidad de Sevilla, Sevilla, Spain.
José-Enrique Ruiz-SainzDepartamento de Microbiología, Facultad de Biología, Universidad de Sevilla, Sevilla, Spain.
Miguel-Ángel Rodríguez-CarvajalDepartamento of Química Orgánica, Facultad de Química, Universidad de Sevilla, Sevilla, Spain.
José-María VinardellDepartamento de Microbiología, Facultad de Biología, Universidad de Sevilla, Sevilla, Spain.ORCID http://orcid.org/0000-0002-7105-5389

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In the rhizobia-legume symbiotic interaction, bacterial surface polysaccharides, such as exopolysaccharide (EPS), lipopolysaccharide (LPS), K-antigen polysaccharide (KPS) or cyclic glucans (CG), appear to play crucial roles either acting as signals required for the progression of the interaction and/or preventing host defence mechanisms. The symbiotic significance of each of these polysaccharides varies depending on the specific rhizobia-legume couple. In this work we show that the production of exopolysaccharide by Sinorhizobium fredii HH103, but not by other S. fredii strains such as USDA257 or NGR234, is repressed by nod gene inducing flavonoids such as genistein and that this repression is dependent on the presence of a functional NodD1 protein. In agreement with the importance of EPS for bacterial biofilms, this reduced EPS production upon treatment with flavonoids correlates with decreased biofilm formation ability. By using quantitative RT-PCR analysis we show that expression of the exoY2 and exoK genes is repressed in late stationary cultures of S. fredii HH103 upon treatment with genistein. Results presented in this work show that in S. fredii HH103 EPS production is regulated just in the opposite way than other bacterial signals such as Nod factors and type 3 secreted effectors: it is repressed by flavonoids and NodD1 and enhanced by the nod repressor NolR. These results are in agreement with our previous observations showing that lack of EPS production by S. fredii HH103 is not only non-detrimental but even beneficial for symbiosis with soybean.

Indexed as

Sinorhizobium frediiBacterial ProteinsDown-RegulationFlavonoidsGene Expression Regulation, BacterialGenes, BacterialGenisteinPolysaccharides, BacterialBacterial ProteinsFlavonoidsGenisteinNodD protein, BacteriaPolysaccharides, Bacterial

Identifiers

PMID27486751
PMCPMC4972438

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.